RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SLCO1B1Q9Y6L6 691 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 DMXL2Q8TDJ6 3036 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 EDDM13A0A1B0GTR0 161 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 TARSL2A2RTX5 802 aaKnown RBP19.33■□□□□ 0.68
PNKP-213ENST00000599543 FAM47DPA6NHR8 397 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 TTC34A8MYJ7 566 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 FTH1P19P0C7X4 201 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 SNX16P57768 344 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 CST6Q15828 149 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 KIF19Q2TAC6 998 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 RABGAP1LQ5R372 815 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 C9orf64Q5T6V5 341 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 ADAT2Q7Z6V5 191 aaKnown RBP19.33■□□□□ 0.68
PNKP-213ENST00000599543 MMAAQ8IVH4 418 aaKnown RBP19.33■□□□□ 0.68
PNKP-213ENST00000599543 APCDD1Q8J025 514 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 DEFB106AQ8N104 65 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 SLC2A13Q96QE2 648 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 OMDQ99983 421 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 BPIFA3Q9BQP9 254 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 SYNCQ9H7C4 482 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 PKD1L2Q7Z442 2459 aa19.33■□□□□ 0.68
PNKP-213ENST00000599543 ANKRD11Q6UB99 2663 aaPredicted RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 ITIH6Q6UXX5 1313 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 A0A1B0GVM2 712 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 A0A1W2PP55 124 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 TCAF2A6NFQ2 919 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 MID1O15344 667 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 FLRT2O43155 660 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 GRAP2O75791 330 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 RNASEH2AO75792 299 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 KRT9P35527 623 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 NNMTP40261 264 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 EIF4EBP2Q13542 120 aaPredicted RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 SLC12A1Q13621 1099 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 KIAA0895LQ68EN5 471 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 SMYD5Q6GMV2 418 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 DPY19L2P1Q6NXN4 242 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 FAM183BPQ6ZVS7 135 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 APTXQ7Z2E3 356 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 RAB44Q7Z6P3 723 aaPredicted RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 CIR1Q86X95 450 aaPredicted RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 CCAR2Q8N163 923 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 WDTC1Q8N5D0 677 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 C1orf131Q8NDD1 294 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 ZCCHC14Q8WYQ9 949 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 RPL10LQ96L21 214 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 PRMT1Q99873 361 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 SERGEFQ9UGK8 458 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 DNAJC12Q9UKB3 198 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 APOBEC2Q9Y235 224 aaKnown RBP19.32■□□□□ 0.68
PNKP-213ENST00000599543 ANKRD6Q9Y2G4 727 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 PCDHGB2Q9Y5G2 931 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 SNX11Q9Y5W9 270 aa19.32■□□□□ 0.68
PNKP-213ENST00000599543 LRRC72A6NJI9 287 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 SMTNL1A8MU46 457 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 CBFA2T3O75081 653 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 TPM2P07951 284 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 PDGFRAP16234 1089 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 PSMD8P48556 350 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 NUMBP49757 651 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 OXCT1P55809 520 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 SULT2A1Q06520 285 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 NME3Q13232 169 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 MTA1Q13330 715 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 SUZ12Q15022 739 aaKnown RBP19.31■□□□□ 0.68
PNKP-213ENST00000599543 OR6B2Q6IFH4 312 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 NCEH1Q6PIU2 408 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 LRSAM1Q6UWE0 723 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 OLFML1Q6UWY5 402 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 LAYNQ6UX15 382 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 SLC47A2Q86VL8 602 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 PNPLA1Q8N8W4 532 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 RPRD1AQ96P16 312 aaPredicted RBP19.31■□□□□ 0.68
PNKP-213ENST00000599543 SLCO3A1Q9UIG8 710 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 FZD4Q9ULV1 537 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 FHOD1Q9Y613 1164 aa19.31■□□□□ 0.68
PNKP-213ENST00000599543 PTPRBP23467 1997 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 LAMA5O15230 3695 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 DAB1O75553 588 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 ADH1BP00325 375 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 ERBB2P04626 1255 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 IGHV4-34P06331 123 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 SLC8A1P32418 973 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 STK19P49842 368 aaPredicted RBP19.3■□□□□ 0.68
PNKP-213ENST00000599543 GALCP54803 685 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 ELAVL3Q14576 367 aaKnown RBP19.3■□□□□ 0.68
PNKP-213ENST00000599543 FBXL22Q6P050 247 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 GLRX5Q86SX6 157 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 ANKRD20A12PQ8NF67 263 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 ADAMTS14Q8WXS8 1223 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 IGSF8Q969P0 613 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 PPP1R9BQ96SB3 815 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 NEUROG2Q9H2A3 272 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 ADAMTS1Q9UHI8 967 aa19.3■□□□□ 0.68
PNKP-213ENST00000599543 FAM221BA6H8Z2 402 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 LGALS16A8MUM7 142 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 FOXN3O00409 490 aaPredicted RBP19.29■□□□□ 0.68
PNKP-213ENST00000599543 EPHB6O15197 1021 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 IL1BP01584 269 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 MZF1P28698 734 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms