RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 DNTTP04053 509 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 CFIP05156 583 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 KRT3P12035 628 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 NNMTP40261 264 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 STK19P49842 368 aaPredicted RBP23.26■■□□□ 1.31
CCDC9-204ENST00000599398 LIMK1P53667 647 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 CDH4P55283 916 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 IRX4P78413 519 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 SULT2A1Q06520 285 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 C15orf59Q2T9L4 293 aaPredicted RBP23.26■■□□□ 1.31
CCDC9-204ENST00000599398 C5orf22Q49AR2 442 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 SYCP2LQ5T4T6 812 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 ZNF776Q68DI1 518 aaPredicted RBP23.26■■□□□ 1.31
CCDC9-204ENST00000599398 KDM1BQ8NB78 822 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 FOXJ1Q92949 421 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 NUP58Q9BVL2 599 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 NUSAP1Q9BXS6 441 aaKnown RBP23.26■■□□□ 1.31
CCDC9-204ENST00000599398 SLCO3A1Q9UIG8 710 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 MEI4A8MW99 385 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 GOLGA6L19H0YKK7 550 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 RNASEH1O60930 286 aaKnown RBP23.25■■□□□ 1.31
CCDC9-204ENST00000599398 SRGAP2O75044 1071 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 TNFAIP3P21580 790 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 PLK1P53350 603 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 RPS14P62263 151 aaKnown RBP23.25■■□□□ 1.31
CCDC9-204ENST00000599398 ASIC2Q16515 512 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 CCDC14Q49A88 953 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 ACBD5Q5T8D3 534 aaPredicted RBP23.25■■□□□ 1.31
CCDC9-204ENST00000599398 BNIPLQ7Z465 357 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 IRF2BP2Q7Z5L9 587 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 ZNF419Q96HQ0 510 aaPredicted RBP23.25■■□□□ 1.31
CCDC9-204ENST00000599398 C1orf74Q96LT6 269 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 MUC3BQ9H195 1237 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 EVLQ9UI08 416 aaPredicted RBP23.25■■□□□ 1.31
CCDC9-204ENST00000599398 VPS28Q9UK41 221 aa23.25■■□□□ 1.31
CCDC9-204ENST00000599398 EDDM13A0A1B0GTR0 161 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 C2CD4BA6NLJ0 364 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 E9PAM4 449 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 RHOCP08134 193 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 HOXD12P35452 270 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 GSCP56915 257 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-204ENST00000599398 C1QBPQ07021 282 aaKnown RBP23.24■■□□□ 1.31
CCDC9-204ENST00000599398 DUOXA1Q1HG43 343 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 ZSCAN23Q3MJ62 389 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 TTC31Q49AM3 519 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-204ENST00000599398 RAB6CQ53S08 254 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 ALFQ53S48 1182 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 WDR45BQ5MNZ6 344 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 SH3PXD2AQ5TCZ1 1133 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 LRSAM1Q6UWE0 723 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 MON1BQ7L1V2 547 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 C3orf20Q8ND61 904 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 OR52K2Q8NGK3 314 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 GANCQ8TET4 914 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 HAPLN3Q96S86 360 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 FEM1AQ9BSK4 669 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 RAB6CQ9H0N0 254 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 MPP6Q9NZW5 540 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 SLC25A13Q9UJS0 675 aa23.24■■□□□ 1.31
CCDC9-204ENST00000599398 CNOT1A5YKK6 2376 aaKnown RBP23.24■■□□□ 1.31
CCDC9-204ENST00000599398 DOCK4Q8N1I0 1966 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ENDOD1O94919 500 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 IGLV3-19P01714 112 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 RFC1P35251 1148 aaPredicted RBP23.23■■□□□ 1.31
CCDC9-204ENST00000599398 PTPN9P43378 593 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 FANCCQ00597 558 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ZBTB16Q05516 673 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ARID5BQ14865 1188 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 NR1I3Q14994 352 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 SKOR2Q2VWA4 1001 aaPredicted RBP23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ARL13BQ3SXY8 428 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 C9orf64Q5T6V5 341 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 SFMBT2Q5VUG0 894 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 PEAR1Q5VY43 1037 aaPredicted RBP23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ACAD10Q6JQN1 1059 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 DNAJC24Q6P3W2 148 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 RABEPKQ7Z6M1 372 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 TFAP2DQ7Z6R9 452 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ZNF683Q8IZ20 524 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 CEP76Q8TAP6 659 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 RSPH9Q9H1X1 276 aaPredicted RBP23.23■■□□□ 1.31
CCDC9-204ENST00000599398 TBC1D30Q9Y2I9 924 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 ITIH6Q6UXX5 1313 aa23.23■■□□□ 1.31
CCDC9-204ENST00000599398 TARSL2A2RTX5 802 aaKnown RBP23.22■■□□□ 1.31
CCDC9-204ENST00000599398 ANKRD62A6NC57 917 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 DRGXA6NNA5 263 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 C4orf47A7E2U8 309 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 TMCO5BA8MYB1 307 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 GPD1P21695 349 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 KCNA4P22459 653 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 MAOBP27338 520 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 FOXK2Q01167 660 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 SLC23A3Q6PIS1 610 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 WDR59Q6PJI9 974 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 STRADAQ7RTN6 431 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 CADM4Q8NFZ8 388 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 FAM172AQ8WUF8 416 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 ALG14Q96F25 216 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 TMEM9BQ9NQ34 198 aa23.22■■□□□ 1.31
CCDC9-204ENST00000599398 NYNRINQ9P2P1 1898 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms