RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ELOVL2Q9NXB9 296 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 SAR1BQ9Y6B6 198 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 STON1Q9Y6Q2 735 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 DDX3XO00571 662 aaKnown RBP eCLIP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 DCLK1O15075 740 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 RPP40O75818 363 aaKnown RBP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 LUC7L3O95232 432 aaKnown RBP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 F9P00740 461 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 HLA-EP13747 358 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 GPD1P21695 349 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 RDXP35241 583 aaKnown RBP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 PRKCIP41743 596 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF234Q14588 700 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 FUT11Q495W5 492 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 HSF5Q4G112 596 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 RABGAP1LQ5R372 815 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 CCDC122Q5T0U0 273 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 MPP7Q5T2T1 576 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 MBLAC2Q68D91 279 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 WDR59Q6PJI9 974 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 ADIPOR2Q86V24 386 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 AHI1Q8N157 1196 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 DCLK2Q8N568 766 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 SUMF1Q8NBK3 374 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 UCMAQ8WVF2 138 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 RLN3Q8WXF3 142 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 ARHGEF38Q9NXL2 777 aa12.45□□□□□ -0.42
ZNF548-209ENST00000598895 MUC22E2RYF6 1773 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-209ENST00000598895 A0A1W2PQF6 199 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 SRGAP2O75044 1071 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 ALDH1A2O94788 518 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 GABRG2P18507 467 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 POLR2EP19388 210 aaKnown RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 PRKCHP24723 683 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 HOXA6P31267 233 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 CSKP41240 450 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 HNRNPH2P55795 449 aaKnown RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 RPL7AP62424 266 aaKnown RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 CASP8Q14790 479 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 EIF4HQ15056 248 aaKnown RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 SPA17Q15506 151 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 FNDC3BQ53EP0 1204 aaKnown RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 BRMS1LQ5PSV4 323 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 HGSNATQ68CP4 663 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 SERPINA13PQ6UXR4 307 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 RASSF3Q86WH2 238 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 APCDD1Q8J025 514 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 FRMD1Q8N878 549 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 FIBINQ8TAL6 211 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 KCNV2Q8TDN2 545 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 WFIKKN2Q8TEU8 576 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 FAM172AQ8WUF8 416 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 GAB3Q8WWW8 586 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 PGAP3Q96FM1 320 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 MAGEB5Q9BZ81 275 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 THAP10Q9P2Z0 257 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 NCDNQ9UBB6 729 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 INTS6Q9UL03 887 aaKnown RBP12.44□□□□□ -0.42
ZNF548-209ENST00000598895 RAB23Q9ULC3 237 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 GUCA1BQ9UMX6 200 aa12.44□□□□□ -0.42
ZNF548-209ENST00000598895 TCRBV5S1A1TA0A578 114 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 CNTN5O94779 1100 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 FTLP02792 175 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 SERPING1P05155 500 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 EPHX1P07099 455 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 RHOXF2BP0C7M4 288 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 MZF1P28698 734 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 ACTN2P35609 894 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 CTSOP43234 321 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 PTPN9P43378 593 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 GSCP56915 257 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 KIF5AQ12840 1032 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 PITRM1Q5JRX3 1037 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 SCYL2Q6P3W7 929 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 ARCQ7LC44 396 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 BNIPLQ7Z465 357 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 KIAA0907Q7Z7F0 614 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 KBTBD6Q86V97 674 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 CCDC185Q8N715 623 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 OR52K2Q8NGK3 314 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF653Q96CK0 615 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 LMLNQ96KR4 655 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 GABRG3Q99928 467 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 SEMA4AQ9H3S1 761 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 MTG2Q9H4K7 406 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms