RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SPPL2BQ8TCT7 592 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 ASB11Q8WXH4 323 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 DDX1Q92499 740 aaKnown RBP10.88□□□□□ -0.67
SMG9-207ENST00000598860 PTPRN2Q92932 1015 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 SMARCD1Q96GM5 515 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 NOX5Q96PH1 765 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 SYT11Q9BT88 431 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 DPEP3Q9H4B8 488 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 CAAP1Q9H8G2 361 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 LUC7LQ9NQ29 371 aaKnown RBP10.88□□□□□ -0.67
SMG9-207ENST00000598860 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 MAN1C1Q9NR34 630 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 SEMA3GQ9NS98 782 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 FAM49BQ9NUQ9 324 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 HSFX1Q9UBD0 423 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 NR2E1Q9Y466 385 aa10.88□□□□□ -0.67
SMG9-207ENST00000598860 CCDC195A0A1B0GUA6 201 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 M0QYV0 167 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 DNAJC8O75937 253 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 FAM200BP0CF97 657 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 SRFP11831 508 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 GZMAP12544 262 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 SKILP12757 684 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 MAGEA11P43364 429 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 KIF11P52732 1056 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 SNX16P57768 344 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 FMO1Q01740 532 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 SLC18A3Q16572 532 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 GOLGA7BQ2TAP0 167 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 HS1BP3Q53T59 392 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 TAF3Q5VWG9 929 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 LILRA6Q6PI73 481 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 VSTM1Q6UX27 236 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 ZNF571Q7Z3V5 609 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 GPR149Q86SP6 731 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 LRRTM3Q86VH5 581 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 SPATA2LQ8IUW3 424 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 TMEM139Q8IV31 216 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 TXLNBQ8N3L3 684 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 ZNF655Q8N720 491 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 ANKRD52Q8NB46 1076 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 TMEM35BQ8NCS4 154 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 CMASQ8NFW8 434 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 TFAP2BQ92481 460 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 MYLPFQ96A32 169 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 PCED1BQ96HM7 432 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 CEP295NLQ96MC4 621 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 MED10Q9BTT4 135 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMG9-207ENST00000598860 MIS12Q9H081 205 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 PLEKHA4Q9H4M7 779 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 POMKQ9H5K3 350 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 NHEJ1Q9H9Q4 299 aaPredicted RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 SEPT11Q9NVA2 429 aaKnown RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 AFF4Q9UHB7 1163 aaKnown RBP10.87□□□□□ -0.67
SMG9-207ENST00000598860 CDH22Q9UJ99 828 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 GTF3C4Q9UKN8 822 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 TSPAN16Q9UKR8 245 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 CDY1Q9Y6F8 540 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 ANAPC1Q9H1A4 1944 aa10.87□□□□□ -0.67
SMG9-207ENST00000598860 MYO10Q9HD67 2058 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 EIF3CLB5ME19 914 aaKnown RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 TGM5O43548 720 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 HCRTO43612 131 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 ATP2C2O75185 946 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 MMEP08473 750 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 CCDC130P13994 396 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 OR1D2P34982 312 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 CCZ1BP86790 482 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 CCZ1P86791 482 aaPredicted RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 ROR1Q01973 937 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 SPA17Q15506 151 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 ASTE1Q2TB18 679 aaPredicted RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 SLC39A12Q504Y0 691 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 USP53Q70EK8 1073 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 MAMDC2Q7Z304 686 aaPredicted RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 FUKQ8N0W3 1084 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 C12orf29Q8N999 325 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 KREMEN2Q8NCW0 462 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 ZNF461Q8TAF7 563 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 IPO4Q8TEX9 1081 aaKnown RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 SLC20A1Q8WUM9 679 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 TCTN2Q96GX1 697 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 EIF3CQ99613 913 aaKnown RBP10.86□□□□□ -0.67
SMG9-207ENST00000598860 CHP1Q99653 195 aa10.86□□□□□ -0.67
SMG9-207ENST00000598860 B3GNT5Q9BYG0 378 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms