RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 KRT81Q14533 505 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 PLK5Q496M5 336 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 STXBP5Q5T5C0 1151 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 ERMARDQ5T6L9 678 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 SEL1L2Q5TEA6 688 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 PSTKQ8IV42 348 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 CCDC50Q8IVM0 306 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 UNC45BQ8IWX7 931 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 KATNAL2Q8IYT4 538 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 CCDC185Q8N715 623 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 ATP6V0D2Q8N8Y2 350 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 HNRNPLLQ8WVV9 542 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 KRT35Q92764 455 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 RBM41Q96IZ5 413 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 LRIG1Q96JA1 1093 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 PSMB7Q99436 277 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 TKTL2Q9H0I9 626 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 DUSP15Q9H1R2 295 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 SMPD4Q9NXE4 827 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 LSM7Q9UK45 103 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 SNX12Q9UMY4 172 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 CPQQ9Y646 472 aa12.45□□□□□ -0.42
SHKBP1-213ENST00000597325 TEX15Q9BXT5 2789 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 NUP205Q92621 2012 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 LRRD1A4D1F6 860 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 IGLV3-27P01718 113 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 RARAP10276 462 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 IL1R2P27930 398 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 ADRA1BP35368 520 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 MARCKSL1P49006 195 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 SLC11A2P49281 568 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 SCAPQ12770 1279 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 LRRC32Q14392 662 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 KCNT1Q5JUK3 1230 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 ACBD5Q5T8D3 534 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 TXNRD3NBQ6F5E7 133 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 MAP7D3Q8IWC1 876 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 CMTM8Q8IZV2 173 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 KCTD6Q8NC69 237 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 SLC39A13Q96H72 371 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 FCRL2Q96LA5 508 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 SLC22A12Q96S37 553 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 CYP2S1Q96SQ9 504 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 KLF16Q9BXK1 252 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 SLC46A2Q9BY10 475 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 DHX35Q9H5Z1 703 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 TMEM9BQ9NQ34 198 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 GPATCH2LQ9NWQ4 482 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 ARHGEF38Q9NXL2 777 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 FZD10Q9ULW2 581 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 ARHGAP26Q9UNA1 814 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 SH3BP1Q9Y3L3 701 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 ANAPC1Q9H1A4 1944 aa12.44□□□□□ -0.42
SHKBP1-213ENST00000597325 HELZP42694 1942 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 DENND4CQ5VZ89 1909 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 BCLAF3A2AJT9 711 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 H3BRJ5 948 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 MOSPD3O75425 235 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 STC2O76061 302 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 URI1O94763 535 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 ZRANB2O95218 330 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 CORO1AP31146 461 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 PXNP49023 591 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 CDH6P55285 790 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 EIF4EBP2Q13542 120 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 PDK2Q15119 407 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 PPP6R3Q5H9R7 873 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 CCDC181Q5TID7 509 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 CYP4V2Q6ZWL3 525 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 RCOR2Q8IZ40 523 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 ALG3Q92685 438 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 PBKQ96KB5 322 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 HAPLN3Q96S86 360 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 OSBPL9Q96SU4 736 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 EPAS1Q99814 870 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 CALN1Q9BXU9 219 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 CARD9Q9H257 536 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 KIF9Q9HAQ2 790 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 RAI2Q9Y5P3 530 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 SAR1BQ9Y6B6 198 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 MGAQ8IWI9 3026 aa12.43□□□□□ -0.42
SHKBP1-213ENST00000597325 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
SHKBP1-213ENST00000597325 CEP104O60308 925 aa12.42□□□□□ -0.42
SHKBP1-213ENST00000597325 PAGE1O75459 146 aa12.42□□□□□ -0.42
SHKBP1-213ENST00000597325 LATS1O95835 1130 aa12.42□□□□□ -0.42
SHKBP1-213ENST00000597325 PRLRP16471 622 aa12.42□□□□□ -0.42
SHKBP1-213ENST00000597325 GDI1P31150 447 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms