RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ARRDC1-AS1Q9H2J1 176 aa21.7■■□□□ 1.06
PNKP-209ENST00000596726 PRSS16Q9NQE7 514 aa21.7■■□□□ 1.06
PNKP-209ENST00000596726 USP36Q9P275 1121 aaKnown RBP21.7■■□□□ 1.06
PNKP-209ENST00000596726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.7■■□□□ 1.063e-9■□□□□ 10.7
PNKP-209ENST00000596726 NYNRINQ9P2P1 1898 aaKnown RBP21.69■■□□□ 1.06
PNKP-209ENST00000596726 CHD5Q8TDI0 1954 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 CCP110O43303 1012 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 SERPING1P05155 500 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 ST8SIA6P61647 398 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 OGDHQ02218 1023 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 CSRP2Q16527 193 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 ARL13BQ3SXY8 428 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 SPDYCQ5MJ68 293 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 PLA2G2CQ5R387 149 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 KIAA1324Q6UXG2 1013 aaKnown RBP21.69■■□□□ 1.06
PNKP-209ENST00000596726 NTAN1Q96AB6 310 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 SIPA1Q96FS4 1042 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 PPP1R9BQ96SB3 815 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 CNPY3Q9BT09 278 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 FBRSQ9HAH7 460 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 CD93Q9NPY3 652 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 ITM2CQ9NQX7 267 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 SEMA4GQ9NTN9 838 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 PARVAQ9NVD7 372 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 PPARGC1AQ9UBK2 798 aaKnown RBP21.69■■□□□ 1.06
PNKP-209ENST00000596726 ZNF212Q9UDV6 495 aa21.69■■□□□ 1.06
PNKP-209ENST00000596726 GON4LQ3T8J9 2241 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 ANKRD62A6NC57 917 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 CASP14P31944 242 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 VASPP50552 380 aaPredicted RBP21.68■■□□□ 1.06
PNKP-209ENST00000596726 SULT2A1Q06520 285 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 HNRNPA1L2Q32P51 320 aaKnown RBP21.68■■□□□ 1.06
PNKP-209ENST00000596726 TDRD12Q587J7 1177 aaKnown RBP21.68■■□□□ 1.06
PNKP-209ENST00000596726 MANEALQ5VSG8 457 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 DCUN1D2Q6PH85 259 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 SLC36A4Q6YBV0 504 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 LPCAT2Q7L5N7 544 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 SETD3Q86TU7 594 aaPredicted RBP21.68■■□□□ 1.06
PNKP-209ENST00000596726 CCDC185Q8N715 623 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 MTG2Q9H4K7 406 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 MPP6Q9NZW5 540 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 OR12D3Q9UGF7 316 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 ADAMTS1Q9UHI8 967 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 SLCO3A1Q9UIG8 710 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 CYP8B1Q9UNU6 501 aa21.68■■□□□ 1.06
PNKP-209ENST00000596726 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 BCLAF3A2AJT9 711 aaKnown RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 MAP3K13O43283 966 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 ATMINO43313 823 aaPredicted RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 SRGAP2O75044 1071 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 IGLV3-19P01714 112 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 PLEKP08567 350 aaPredicted RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 HNRNPH3P31942 346 aaKnown RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 SCAPQ12770 1279 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 RNF219Q5W0B1 726 aaPredicted RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 TMEFF1Q8IYR6 380 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 PRCCQ92733 491 aaPredicted RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 RPL10LQ96L21 214 aaKnown RBP21.67■■□□□ 1.06
PNKP-209ENST00000596726 MAGEB5Q9BZ81 275 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 ZYG11BQ9C0D3 744 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 USP18Q9UMW8 372 aa21.67■■□□□ 1.06
PNKP-209ENST00000596726 LAMA1P25391 3075 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 TARSL2A2RTX5 802 aaKnown RBP21.66■■□□□ 1.06
PNKP-209ENST00000596726 TMEM191CA6NGB0 347 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 TTC34A8MYJ7 566 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 RHOCP08134 193 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 ZNF806P0C7X5 589 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 MPLP40238 635 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 STK19P49842 368 aaPredicted RBP21.66■■□□□ 1.06
PNKP-209ENST00000596726 TPMTP51580 245 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 C9orf64Q5T6V5 341 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 SPECC1LQ69YQ0 1117 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 PSMB7Q99436 277 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 ARHGAP20Q9P2F6 1191 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 CNOT8Q9UFF9 292 aaKnown RBP21.66■■□□□ 1.06
PNKP-209ENST00000596726 NEU3Q9UQ49 428 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 SPTBN4Q9H254 2564 aa21.66■■□□□ 1.06
PNKP-209ENST00000596726 PI4KAP42356 2102 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 FAM72CH0Y354 149 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 AP5Z1O43299 807 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 SIN3BO75182 1162 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 MYBL1P10243 752 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 DHPSP49366 369 aaPredicted RBP21.65■■□□□ 1.06
PNKP-209ENST00000596726 NUMBP49757 651 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 RPS14P62263 151 aaKnown RBP21.65■■□□□ 1.06
PNKP-209ENST00000596726 RPL6Q02878 288 aaKnown RBP21.65■■□□□ 1.06
PNKP-209ENST00000596726 CREB5Q02930 508 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 TRIM14Q14142 442 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 FAM72AQ5TYM5 149 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 FAM72DQ6L9T8 149 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 PRR23CQ6ZRP0 262 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 TMC6Q7Z403 805 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 TFAP2DQ7Z6R9 452 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 SLFN11Q7Z7L1 901 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 FAM72BQ86X60 149 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 VSTM4Q8IW00 320 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 DRC7Q8IY82 874 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 FNIP1Q8TF40 1166 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 PTPRN2Q92932 1015 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 ZNF653Q96CK0 615 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms