RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CNOT11Q9UKZ1 510 aaKnown RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 RPS6KL1Q9Y6S9 549 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 A0A087WZ62 844 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ERI2A8K979 691 aaKnown RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 MATN2O00339 956 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 TXNDC9O14530 226 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 HDAC3O15379 428 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 STRNO43815 780 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 DNAJA2O60884 412 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ERVK-10P10266 1014 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 PSMB4P28070 264 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 IFRD2Q12894 506 aaPredicted RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 TLR1Q15399 786 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ADRM1Q16186 407 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 HSP90AA5PQ58FG0 334 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 PIGGQ5H8A4 983 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 BORAQ6PGQ7 559 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 PGAM4Q8N0Y7 254 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 DDI1Q8WTU0 396 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 PGBD4Q96DM1 585 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ZNF668Q96K58 619 aaPredicted RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 LRGUKQ96M69 825 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 LENG8Q96PV6 779 aaPredicted RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 FDXACB1Q9BRP7 624 aaPredicted RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 DNAI2Q9GZS0 605 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 IL22Q9GZX6 179 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 DRC3Q9H069 523 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 OXSMQ9NWU1 459 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ERAP1Q9NZ08 941 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 PHF24Q9UPV7 400 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 SBF1O95248 1867 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 A0A096LPK6 155 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 MAGEB16A2A368 324 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 CAPN8A6NHC0 703 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 E9PBE3 544 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 H0YJX3 145 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 KLHL41O60662 606 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 TNFAIP8O95379 198 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 SLC25A27O95847 323 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 CYP2C9P11712 490 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 MLH1P40692 756 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 MATKP42679 507 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 CSRP3P50461 194 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 USP4Q13107 963 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ZNF423Q2M1K9 1284 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 DCAF4L1Q3SXM0 396 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 SLC25A52Q3SY17 297 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 NAPRTQ6XQN6 538 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 B3GNT6Q6ZMB0 384 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 BNIPLQ7Z465 357 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 STRA8Q7Z7C7 330 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 SATL1Q86VE3 508 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 PLD6Q8N2A8 252 aaKnown RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 FAM81AQ8TBF8 368 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 MAPK15Q8TD08 544 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
VRK3-209ENST00000594948 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 LGMNQ99538 433 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 MCMBPQ9BTE3 642 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 SHCBP1LQ9BZQ2 653 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 CASS4Q9NQ75 786 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 NSMCE4AQ9NXX6 385 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 MFHAS1Q9Y4C4 1052 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
VRK3-209ENST00000594948 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
VRK3-209ENST00000594948 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 TADA2AO75478 443 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 DAB1O75553 588 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 CABYRO75952 493 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 AP2A1O95782 977 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 CLPTM1O96005 669 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 ASLP04424 464 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 TFAP2AP05549 437 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 PMLP29590 882 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 NUDT2P50583 147 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.25
VRK3-209ENST00000594948 PRKAA1Q13131 559 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 SH2D4BQ5SQS7 431 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 ARMC3Q5W041 872 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 FSTL4Q6MZW2 842 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 ZYG11AQ6WRX3 759 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 EEPD1Q7L9B9 569 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 CMC1Q7Z7K0 106 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 DSELQ8IZU8 1212 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 CRYBG2Q8N1P7 616 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 CNTD1Q8N815 330 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 HIPK4Q8NE63 616 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 ZNF669Q96BR6 464 aaPredicted RBP13.52□□□□□ -0.25
VRK3-209ENST00000594948 CPB2Q96IY4 423 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms