RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 F9P00740 461 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 CD59P13987 128 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 TFE3P19532 575 aaPredicted RBP24.18■■□□□ 1.46
LSM4-204ENST00000594828 GGCXP38435 758 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 STK19P49842 368 aaPredicted RBP24.18■■□□□ 1.46
LSM4-204ENST00000594828 KLK7P49862 253 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 POLR2FP61218 127 aaKnown RBP24.18■■□□□ 1.46
LSM4-204ENST00000594828 DEUP1Q05D60 604 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 C2CD6Q53TS8 623 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 C14orf80Q86SX3 495 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 ZNF677Q86XU0 584 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 PTPRN2Q92932 1015 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 BIRC7Q96CA5 298 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 PGAP3Q96FM1 320 aaPredicted RBP24.18■■□□□ 1.46
LSM4-204ENST00000594828 FAM207AQ9NSI2 230 aaPredicted RBP24.18■■□□□ 1.46
LSM4-204ENST00000594828 TMEM51Q9NW97 253 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 ARHGEF38Q9NXL2 777 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 PAXBP1Q9Y5B6 917 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 MID1O15344 667 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 CLDN11O75508 207 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 FSBPO95073 299 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 SLC8A1P32418 973 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 IRAK1P51617 712 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 FOXC1Q12948 553 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 SLC25A52Q3SY17 297 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 C5orf22Q49AR2 442 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 FAM129BQ96TA1 746 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 TBCBQ99426 244 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 OMDQ99983 421 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 FEM1AQ9BSK4 669 aa24.17■■□□□ 1.46
LSM4-204ENST00000594828 GOLGA8SH3BPF8 625 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 CDH4P55283 916 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 NOMO3P69849 1222 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 NAA35Q5VZE5 725 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 IL27RAQ6UWB1 636 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 LRSAM1Q6UWE0 723 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 STK40Q8N2I9 435 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 ANKRD20A12PQ8NF67 263 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 OR52K2Q8NGK3 314 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 SLC20A1Q8WUM9 679 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 ALG14Q96F25 216 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 NEUROG2Q9H2A3 272 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 NLRC4Q9NPP4 1024 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 ANLNQ9NQW6 1124 aa24.16■■□□□ 1.46
LSM4-204ENST00000594828 A0A1W2PP55 124 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 FAM47DPA6NHR8 397 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 RNASEH2AO75792 299 aaKnown RBP24.15■■□□□ 1.46
LSM4-204ENST00000594828 ZNF18P17022 549 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 SOX5P35711 763 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 FLT3P36888 993 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 CSNK1EP49674 416 aaKnown RBP24.15■■□□□ 1.46
LSM4-204ENST00000594828 AFF3P51826 1226 aaKnown RBP24.15■■□□□ 1.46
LSM4-204ENST00000594828 COPB1P53618 953 aaKnown RBP24.15■■□□□ 1.46
LSM4-204ENST00000594828 SIM1P81133 766 aaPredicted RBP24.15■■□□□ 1.46
LSM4-204ENST00000594828 STX1AQ16623 288 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 SPAG5Q96R06 1193 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 GAREM1Q9H706 876 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 OSGEPQ9NPF4 335 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 SERGEFQ9UGK8 458 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 SLC25A13Q9UJS0 675 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 TMEM59LQ9UK28 342 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 NOCTQ9UK39 431 aaKnown RBP24.15■■□□□ 1.46
LSM4-204ENST00000594828 VPS28Q9UK41 221 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 TBC1D30Q9Y2I9 924 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 DAAM1Q9Y4D1 1078 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 SLCO1B1Q9Y6L6 691 aa24.15■■□□□ 1.46
LSM4-204ENST00000594828 NUMA1Q14980 2115 aa24.14■■□□□ 1.46
LSM4-204ENST00000594828 SPAARA0A1B0GVQ0 90 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 I6L893 689 aaPredicted RBP24.14■■□□□ 1.45
LSM4-204ENST00000594828 EPHB6O15197 1021 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 SH3BP5O60239 455 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 CD27P26842 260 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 PSMD8P48556 350 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 VASPP50552 380 aaPredicted RBP24.14■■□□□ 1.45
LSM4-204ENST00000594828 GALCP54803 685 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 JAM2P57087 298 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 CDR2Q01850 454 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 BNC1Q01954 994 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 MYL5Q02045 173 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 HNRNPDQ14103 355 aaKnown RBP24.14■■□□□ 1.45
LSM4-204ENST00000594828 ELAVL3Q14576 367 aaKnown RBP24.14■■□□□ 1.45
LSM4-204ENST00000594828 TEAD4Q15561 434 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 ACCSLQ4AC99 568 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 KIAA0895LQ68EN5 471 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 LRRC31Q6UY01 552 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 C1orf74Q96LT6 269 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 PCMTD1Q96MG8 357 aaPredicted RBP24.14■■□□□ 1.45
LSM4-204ENST00000594828 TM9SF3Q9HD45 589 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 LIMA1Q9UHB6 759 aaKnown RBP24.14■■□□□ 1.45
LSM4-204ENST00000594828 ADAMTS1Q9UHI8 967 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 FZD4Q9ULV1 537 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 SIK3Q9Y2K2 1263 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 OR51B4Q9Y5P0 310 aa24.14■■□□□ 1.45
LSM4-204ENST00000594828 A0A1B0GVT2 93 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 CNTN5O94779 1100 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 CER1O95813 267 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 MBD3O95983 291 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 ADH1BP00325 375 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 IL1BP01584 269 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 CYP1A1P04798 512 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms