RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ZCCHC14Q8WYQ9 949 aaKnown RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 RNF34Q969K3 372 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 SKA1Q96BD8 255 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 RPRD1AQ96P16 312 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 OMDQ99983 421 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 ORAI3Q9BRQ5 295 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 MTG2Q9H4K7 406 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 ANKRD6Q9Y2G4 727 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 COL5A1P20908 1838 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 IGF2RP11717 2491 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 A0A1W2PP55 124 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 VILLO15195 856 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 SLC7A4O43246 635 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 PCDHGA12O60330 932 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 CLDN11O75508 207 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 RNASEH2AO75792 299 aaKnown RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 ERBB2P04626 1255 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 PDGFRAP16234 1089 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 GOT1P17174 413 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 MZF1P28698 734 aaPredicted RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 SLC8A1P32418 973 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 CLCN1P35523 988 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 CTSKP43235 329 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 CCR5P51681 352 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 GALCP54803 685 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 APBA1Q02410 837 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 PTPN20Q4JDL3 420 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 OR6B2Q6IFH4 312 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 FBXL22Q6P050 247 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 NCEH1Q6PIU2 408 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 ADAT2Q7Z6V5 191 aaKnown RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 SLC47A2Q86VL8 602 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 MMAAQ8IVH4 418 aaKnown RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 FAM131CQ96AQ9 280 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 PGAP3Q96FM1 320 aaPredicted RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 FAM129BQ96TA1 746 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 ACE2Q9BYF1 805 aaPredicted RBP13.68□□□□□ -0.22
APOC1-209ENST00000592885 SERGEFQ9UGK8 458 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 SLC25A13Q9UJS0 675 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 SNX11Q9Y5W9 270 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 SLCO1B1Q9Y6L6 691 aa13.68□□□□□ -0.22
APOC1-209ENST00000592885 SYNJ2BP-COX16A0A087WUM0 186 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
APOC1-209ENST00000592885 ALOX15BO15296 676 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 YKT6O15498 198 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 DKK1O94907 266 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 NUDT1P36639 197 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 GRK6P43250 576 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 PSMD8P48556 350 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 ADPRHP54922 357 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 C21orf59P57076 290 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 AUHQ13825 339 aaKnown RBP13.67□□□□□ -0.22
APOC1-209ENST00000592885 DPCR1Q3MIW9 517 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 MIIPQ5JXC2 388 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 STK40Q8N2I9 435 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 CHCHD4Q8N4Q1 142 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 TMEM35BQ8NCS4 154 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 RPL10LQ96L21 214 aaKnown RBP13.67□□□□□ -0.22
APOC1-209ENST00000592885 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 NEUROG2Q9H2A3 272 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 COX16Q9P0S2 106 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 SLCO3A1Q9UIG8 710 aa13.67□□□□□ -0.22
APOC1-209ENST00000592885 AJAP1Q9UKB5 411 aaPredicted RBP13.67□□□□□ -0.22
APOC1-209ENST00000592885 ZFHX4Q86UP3 3567 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 FRYQ5TBA9 3013 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 M0QYT0 321 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 ATP9BO43861 1147 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 GRAP2O75791 330 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 F9P00740 461 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 GABRB2P47870 512 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 STK19P49842 368 aaPredicted RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 CDH4P55283 916 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 CENPCQ03188 943 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 NME3Q13232 169 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 ZNF177Q13360 481 aaPredicted RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 SLC45A4Q5BKX6 768 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 OTUD1Q5VV17 481 aaPredicted RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 FAM46CQ5VWP2 391 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 CIR1Q86X95 450 aaPredicted RBP13.66□□□□□ -0.22
APOC1-209ENST00000592885 AADATQ8N5Z0 425 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 RHBDD1Q8TEB9 315 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 FRS2Q8WU20 508 aa13.66□□□□□ -0.22
APOC1-209ENST00000592885 OR8D1Q8WZ84 308 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms