RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 IL21RQ9HBE5 538 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 USP29Q9HBJ7 922 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 SLC22A11Q9NSA0 550 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 SUFUQ9UMX1 484 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 ADAMTS5Q9UNA0 930 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 ADGRL2O95490 1459 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 DUOX2Q9NRD8 1548 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 GRM8O00222 908 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 ZNF213O14771 459 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 USO1O60763 962 aaKnown RBP6.92□□□□□ -1.3
VMP1-215ENST00000592619 HKR1P10072 659 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 PEPDP12955 493 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 ENGP17813 658 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 CXCR5P32302 372 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 GRIA3P42263 894 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 GPD2P43304 727 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 EEFSECP57772 596 aaKnown RBP6.92□□□□□ -1.3
VMP1-215ENST00000592619 TAP1Q03518 808 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 TUBA3CQ13748 450 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 TUBA3EQ6PEY2 450 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 KIAA1324Q6UXG2 1013 aaKnown RBP6.92□□□□□ -1.3
VMP1-215ENST00000592619 BRINP3Q76B58 766 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 SRFBP1Q8NEF9 429 aaKnown RBP6.92□□□□□ -1.3
VMP1-215ENST00000592619 LINC00476Q8WZB0 136 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 SH3KBP1Q96B97 665 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 CHCHD6Q9BRQ6 235 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 PLEKHA5Q9HAU0 1116 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 SLC2A4RGQ9NR83 387 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 ORC3Q9UBD5 711 aaPredicted RBP6.92□□□□□ -1.3
VMP1-215ENST00000592619 VPS4AQ9UN37 437 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 SPATA31A1Q5TZJ5 1347 aa6.92□□□□□ -1.3
VMP1-215ENST00000592619 RNF17Q9BXT8 1623 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 MROH2AA6NES4 1674 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 ANKRD18BA2A2Z9 1011 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 H0YIZ8 118 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 QSOX1O00391 747 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 SPTLC2O15270 562 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 TTLL1O95922 423 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 F9P00740 461 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 WEE2P0C1S8 567 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 NDUFB7P17568 137 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 RPP30P78346 268 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 CDK18Q07002 472 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 PRKG2Q13237 762 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 PTPAQ15257 358 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 NFIL3Q16649 462 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 TSTQ16762 297 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 ERCC6LQ2NKX8 1250 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 RNASE12Q5GAN4 147 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 AARS2Q5JTZ9 985 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 INO80CQ6PI98 192 aaPredicted RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 KIRREL2Q6UWL6 708 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 KYAT3Q6YP21 454 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 LCORLQ8N3X6 602 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 ENDOVQ8N8Q3 282 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 BEND2Q8NDZ0 799 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 HTATIP2Q9BUP3 242 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 SYBUQ9NX95 663 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 MTMR4Q9NYA4 1195 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 CNPY2Q9Y2B0 182 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 DHX29Q7Z478 1369 aaKnown RBP6.91□□□□□ -1.3
VMP1-215ENST00000592619 ERBINQ96RT1 1412 aa6.91□□□□□ -1.3
VMP1-215ENST00000592619 ZC3H13Q5T200 1668 aaKnown RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 RIMS1Q86UR5 1692 aaKnown RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 PGPEP1LA6NFU8 196 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 FAM90A7PA6NKC0 464 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 SH2D7A6NKC9 451 aaPredicted RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 FAM90A22PA8MWA6 464 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 FAM90A12PA8MX19 464 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 FAM90A23PA8MXZ1 464 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 K7ENM7 598 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 KAT7O95251 611 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 METTL18O95568 372 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 SFPQP23246 707 aaKnown RBP eCLIP6.9□□□□□ -1.3
VMP1-215ENST00000592619 CHMP24386 653 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 PEX19P40855 299 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 AGTR2P50052 363 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 NAP1L1P55209 391 aaKnown RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 FOXE3Q13461 319 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 GPR162Q16538 588 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 H1FNTQ75WM6 255 aaPredicted RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 R3HCC1LQ7Z5L2 792 aaKnown RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 ADPRHL1Q8NDY3 354 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 CLPBQ9H078 707 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 THAP1Q9NVV9 213 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 SLC25A10Q9UBX3 287 aaPredicted RBP6.9□□□□□ -1.3
VMP1-215ENST00000592619 POLG2Q9UHN1 485 aa6.9□□□□□ -1.3
VMP1-215ENST00000592619 ANKRD30AQ9BXX3 1397 aa6.9□□□□□ -1.31
VMP1-215ENST00000592619 DEPDC5O75140 1603 aa6.9□□□□□ -1.31
VMP1-215ENST00000592619 GOLGA6L10A0A0M3HER8 536 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 TTC34A8MYJ7 566 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 H3BNC9 293 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 ZBED4O75132 1171 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms