RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 NNMTP40261 264 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 UCNP55089 124 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 TMPRSS3P57727 454 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 RHDQ02161 417 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 OVGP1Q12889 678 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 ZNF211Q13398 564 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 ELAVL3Q14576 367 aaKnown RBP20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 MS4A13Q5J8X5 152 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 PTPRN2Q92932 1015 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 ZNF578Q96N58 590 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 ARHGAP20Q9P2F6 1191 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 KIAA1257Q9ULG3 409 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 PCDHB1Q9Y5F3 818 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 TRIM38O00635 465 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 RTN2O75298 545 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 RHOBTB3O94955 611 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 MOCS2O96007 188 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 F13A1P00488 732 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 EPB41P11171 864 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 NUDT1P36639 197 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 STK19P49842 368 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 DCAF6Q58WW2 860 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 ARHGAP40Q5TG30 622 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 TCERG1LQ5VWI1 586 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 GUF1Q8N442 669 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 CLEC4CQ8WTT0 213 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 FCRL2Q96LA5 508 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 KDM4CQ9H3R0 1056 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 CPNE5Q9HCH3 593 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 CYTH4Q9UIA0 394 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 DMTF1Q9Y222 760 aa20.28■□□□□ 0.84
PRKCSH-216ENST00000592445 MPOP05164 745 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 PRR29P0C7W0 189 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 DRD3P35462 400 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 NUCB2P80303 420 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 PKDCCQ504Y2 493 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 DCAF17Q5H9S7 520 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 PMF1Q6P1K2 205 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 LCLAT1Q6UWP7 414 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 APCDD1Q8J025 514 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 LGI2Q8N0V4 545 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 WBP1Q96G27 269 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 SERPINB11Q96P15 392 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 SPAG5Q96R06 1193 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 RCOR1Q9UKL0 485 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 TLR6Q9Y2C9 796 aa20.27■□□□□ 0.84
PRKCSH-216ENST00000592445 CETN3O15182 167 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 SLC7A4O43246 635 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 GABBR2O75899 941 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 VAV1P15498 845 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 NUMBP49757 651 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 METAP1P53582 386 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 MCCD1P59942 119 aaPredicted RBP20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 GABREP78334 506 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 POM121L1PQ3SYA9 428 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 CBWD6Q4V339 395 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 SETMARQ53H47 684 aaPredicted RBP20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 CBWD3Q5JTY5 395 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 CBWD5Q5RIA9 395 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 DSG4Q86SJ6 1040 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 LSMEM2Q8N112 164 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 SLC25A45Q8N413 288 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 DQX1Q8TE96 717 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 SLC35F5Q8WV83 523 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 KLHDC7BQ96G42 594 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 DEPDC7Q96QD5 511 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 MIS12Q9H081 205 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 TJP2Q9UDY2 1190 aa20.26■□□□□ 0.83
PRKCSH-216ENST00000592445 ARID1BQ8NFD5 2236 aaPredicted RBP20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 PRAMEF26H0Y7S4 382 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 M0QYV0 167 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 FFAR2O15552 330 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 PLRG1O43660 514 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 FBXO21O94952 628 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 CMA1P23946 247 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 LRMPQ12912 555 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 ZCWPW2Q504Y3 356 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 FAM46CQ5VWP2 391 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 TRIM69Q86WT6 500 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 KCNE4Q8WWG9 221 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 HIC2Q96JB3 615 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 CA5BQ9Y2D0 317 aa20.25■□□□□ 0.83
PRKCSH-216ENST00000592445 USP12O75317 370 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 DGKAP23743 735 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 TBXAS1P24557 533 aaPredicted RBP20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 SYKP43405 635 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 NNTQ13423 1086 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 RAP1GAP2Q684P5 730 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 TMEM270Q6UE05 265 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 CHSY1Q86X52 802 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 OR4C6Q8NH72 309 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 OR8D1Q8WZ84 308 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 FAM149B1Q96BN6 582 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 SLC39A13Q96H72 371 aa20.24■□□□□ 0.83
PRKCSH-216ENST00000592445 UCKL1Q9NWZ5 548 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms