RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TPX2Q9ULW0 747 aaKnown RBP9.81□□□□□ -0.84
BRCA1-226ENST00000591534 CACNA1GO43497 2377 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 BICDL2A1A5D9 508 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 EIF4E1BA6NMX2 242 aaKnown RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 SLC16A3O15427 465 aaKnown RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TNFSF14O43557 240 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TSPAN3O60637 253 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 SEMA4FO95754 770 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 VDRP11473 427 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 PABPC1P11940 636 aaKnown RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 CD19P15391 556 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 CD27P26842 260 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 HOXD9P28356 352 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ERCC5P28715 1186 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 CSNK1EP49674 416 aaKnown RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 CCT8P50990 548 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 C21orf59P57076 290 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 STILQ15468 1287 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ZCWPW2Q504Y3 356 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ZNF776Q68DI1 518 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ISM2Q6H9L7 571 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 FOXR2Q6PJQ5 311 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 DBX2Q6ZNG2 339 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 CHST9Q7L1S5 443 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TMPRSS7Q7RTY8 843 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 SCML4Q8N228 414 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 GANCQ8TET4 914 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 SORCS1Q8WY21 1168 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 KCTD13Q8WZ19 329 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 IGSF8Q969P0 613 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TRIM62Q9BVG3 475 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TMEM245Q9H330 911 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 CD93Q9NPY3 652 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ABCB8Q9NUT2 735 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TSPAN16Q9UKR8 245 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ANKRD6Q9Y2G4 727 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 ASCC3Q8N3C0 2202 aaKnown RBP9.8□□□□□ -0.84
BRCA1-226ENST00000591534 IGF2RP11717 2491 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 DMXL2Q8TDJ6 3036 aa9.8□□□□□ -0.84
BRCA1-226ENST00000591534 TRIM49BA6NDI0 452 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 GOLGA6L6A8MZA4 724 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 E9PAM4 449 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 PSMA7O14818 248 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 YKT6O15498 198 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 PCDHGA12O60330 932 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 FSBPO95073 299 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 MOCS3O95396 460 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 ASLP04424 464 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 TPM2P07951 284 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 HLA-FP30511 346 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 PRCPP42785 496 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 PMS1P54277 932 aaKnown RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 FKBP3Q00688 224 aaKnown RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 TAGLNQ01995 201 aaKnown RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 TYRO3Q06418 890 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 ADIGQ0VDE8 80 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 CUL2Q13617 745 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 CAMK4Q16566 473 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 KIF19Q2TAC6 998 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 SLC45A4Q5BKX6 768 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 DCAF17Q5H9S7 520 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 USP30Q70CQ3 517 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 LYSMD3Q7Z3D4 306 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 SLCO6A1Q86UG4 719 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 CACUL1Q86Y37 369 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 KDM1BQ8NB78 822 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 RBBP8NLQ8NC74 664 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 SPATA20Q8TB22 786 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 IRGQQ8WZA9 623 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 EDEM1Q92611 657 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 SEMA4DQ92854 862 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 AZIN2Q96A70 460 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 ACE2Q9BYF1 805 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 IL21RQ9HBE5 538 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 METTL14Q9HCE5 456 aaKnown RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 TM9SF3Q9HD45 589 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 DKK4Q9UBT3 224 aa9.79□□□□□ -0.84
BRCA1-226ENST00000591534 FNDC3AQ9Y2H6 1198 aaKnown RBP9.79□□□□□ -0.84
BRCA1-226ENST00000591534 WDFY3Q8IZQ1 3526 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 ATRXP46100 2492 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 FREM2Q5SZK8 3169 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 MYOFQ9NZM1 2061 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 GON4LQ3T8J9 2241 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 TNRC6BQ9UPQ9 1833 aaKnown RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 MYH10P35580 1976 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 LRRC72A6NJI9 287 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 PCNX2A6NKB5 2137 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 TTLL8A6PVC2 850 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 TAF4O00268 1085 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 SART1O43290 800 aaKnown RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 TBL1XO60907 577 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 FBXO21O94952 628 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 CAPNS1P04632 268 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 PAEPP09466 180 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 HLA-EP13747 358 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms