RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 UPK3BL1B0FP48 263 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 UPK3BL2E5RIL1 263 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 APOEP02649 317 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 SYPP08247 313 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 MAGEA1P43355 309 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 RING1Q06587 406 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 SPA17Q15506 151 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 RAB6CQ53S08 254 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 SYCP2LQ5T4T6 812 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 NUGGCQ68CJ6 796 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 UNQ6494/PRO21346Q6UXR6 183 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 UNC45BQ8IWX7 931 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 FOXJ1Q92949 421 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 NUP85Q9BW27 656 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 RAB6CQ9H0N0 254 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 MRPL47Q9HD33 250 aaKnown RBP20.04■□□□□ 0.8
PTBP1-215ENST00000589883 SUSD2Q9UGT4 822 aa20.04■□□□□ 0.8
PTBP1-215ENST00000589883 ATXN2Q99700 1313 aaKnown RBP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 CEP295Q9C0D2 2601 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 TMEM8BA6NDV4 472 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 TMEM191CA6NGB0 347 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 PRRT4C9JH25 899 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 CCP110O43303 1012 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 OPHN1O60890 802 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 NDUFA10O95299 355 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 CYBBP04839 570 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 TMEM253P0C7T8 217 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 GNSP15586 552 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 NDUFV2P19404 249 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 PSMA2P25787 234 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 CCR1P32246 355 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 PTPN9P43378 593 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 ZNF143P52747 638 aaPredicted RBP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 EIF4EBP2Q13542 120 aaPredicted RBP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 HNRNPDQ14103 355 aaKnown RBP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 SND1Q7KZF4 910 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 FAM172AQ8WUF8 416 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 ACOX2Q99424 681 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 GTPBP2Q9BX10 602 aaKnown RBP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 XPO7Q9UIA9 1087 aaKnown RBP20.03■□□□□ 0.8
PTBP1-215ENST00000589883 HCN2Q9UL51 889 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 CYP8B1Q9UNU6 501 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 SLC27A6Q9Y2P4 619 aa20.03■□□□□ 0.8
PTBP1-215ENST00000589883 EIF3CLB5ME19 914 aaKnown RBP20.02■□□□□ 0.8
PTBP1-215ENST00000589883 LCA5LO95447 670 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 F9P00740 461 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 CISD3P0C7P0 127 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 SLC11A2P49281 568 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 FAM131BQ86XD5 332 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 RGL4Q8IZJ4 473 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 DEFB119Q8N690 84 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 ACRBPQ8NEB7 543 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 PGAP3Q96FM1 320 aaPredicted RBP20.02■□□□□ 0.8
PTBP1-215ENST00000589883 BTBD6Q96KE9 485 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 EIF3CQ99613 913 aaKnown RBP20.02■□□□□ 0.8
PTBP1-215ENST00000589883 CNPY3Q9BT09 278 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 CAPN10Q9HC96 672 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 CACNA2D2Q9NY47 1150 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 CTTNBP2NLQ9P2B4 639 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 FBXO10Q9UK96 956 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 TFR2Q9UP52 801 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 PCDHA13Q9Y5I0 950 aa20.02■□□□□ 0.8
PTBP1-215ENST00000589883 GOLGA6L7A0A1B0GV03 622 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 ACSL4O60488 711 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 IPO7O95373 1038 aaKnown RBP20.01■□□□□ 0.79
PTBP1-215ENST00000589883 PENKP01210 267 aaPredicted RBP20.01■□□□□ 0.79
PTBP1-215ENST00000589883 SLC2A3P11169 496 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 CXCR3P49682 368 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 SEMA3BQ13214 749 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 WDR45BQ5MNZ6 344 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 KIAA1211LQ6NV74 962 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 KIAA1324Q6UXG2 1013 aaKnown RBP20.01■□□□□ 0.79
PTBP1-215ENST00000589883 BNIPLQ7Z465 357 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 METTL3Q86U44 580 aaKnown RBP20.01■□□□□ 0.79
PTBP1-215ENST00000589883 ATP6V0D2Q8N8Y2 350 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 ZNF564Q8TBZ8 553 aaPredicted RBP20.01■□□□□ 0.79
PTBP1-215ENST00000589883 BHMTQ93088 406 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 ZNF419Q96HQ0 510 aaPredicted RBP20.01■□□□□ 0.79
PTBP1-215ENST00000589883 MRGPRX1Q96LB2 322 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 HSPA12BQ96MM6 686 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 WDCPQ9H6R7 721 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 CD248Q9HCU0 757 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 PLK2Q9NYY3 685 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 ANAPC7Q9UJX3 599 aa20.01■□□□□ 0.79
PTBP1-215ENST00000589883 KCNU1A8MYU2 1149 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 H0Y626 953 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 ARHGAP33O14559 1287 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 SYNCRIPO60506 623 aaKnown RBP20■□□□□ 0.79
PTBP1-215ENST00000589883 TSPAN3O60637 253 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 ENDOD1O94919 500 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 TRIM16O95361 564 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 HDAC4P56524 1084 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 NADSYN1Q6IA69 706 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 STRADAQ7RTN6 431 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 LRRC8AQ8IWT6 810 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 CENPIQ92674 756 aaPredicted RBP20■□□□□ 0.79
PTBP1-215ENST00000589883 BTN2A3PQ96KV6 586 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 DESI2Q9BSY9 194 aa20■□□□□ 0.79
PTBP1-215ENST00000589883 SCNM1Q9BWG6 230 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms