RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 N4BP2L1Q5TBK1 243 aaPredicted RBP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 NAPEPLDQ6IQ20 393 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 LZTR1Q8N653 840 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ZNF669Q96BR6 464 aaPredicted RBP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 BTBD10Q9BSF8 475 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 IL22Q9GZX6 179 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ARHGEF38Q9NXL2 777 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 SHROOM3Q8TF72 1996 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 CCDC195A0A1B0GUA6 201 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 A8MUI8 341 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 PLIN3O60664 434 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 SRGAP2BP0DMP2 458 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 CD68P34810 354 aaPredicted RBP19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 ANKRD20A4Q4UJ75 823 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 FAM26DQ5JW98 314 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 BTBD8Q5XKL5 378 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 CD300LGQ6UXG3 332 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 CTU1Q7Z7A3 348 aaKnown RBP19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 ARID3BQ8IVW6 561 aaPredicted RBP19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 SH3TC2Q8TF17 1288 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 PTCD3Q96EY7 689 aaKnown RBP19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 PPP1R2P1Q96PQ5 205 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 GORASP1Q9BQQ3 440 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 ARL8BQ9NVJ2 186 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 INPP5FQ9Y2H2 1132 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 PTPRDP23468 1912 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 PATJQ8NI35 1801 aa19.59■□□□□ 0.73
PRKCSH-209ENST00000589838 FCHO1O14526 889 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 FGF10O15520 208 aaPredicted RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 IGLV3-25P01717 112 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 AMHP03971 560 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 ESRRAP11474 423 aaPredicted RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 NFKB1P19838 968 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 CCNCP24863 283 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 FLT3LGP49771 235 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 SERPINB8P50452 374 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 ZBTB17Q13105 803 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 PAN2Q504Q3 1202 aaKnown RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 SPATA2LQ8IUW3 424 aaPredicted RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 PCSK9Q8NBP7 692 aaKnown RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 KLHDC9Q8NEP7 349 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 FCRL3Q96P31 734 aaPredicted RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 RBBP8Q99708 897 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 FAM96AQ9H5X1 160 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 CATSPERBQ9H7T0 1116 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 EBF2Q9HAK2 575 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 TMLHEQ9NVH6 421 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 NSMCE4AQ9NXX6 385 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 GABRQQ9UN88 632 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 NOD1Q9Y239 953 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 AAR2Q9Y312 384 aaKnown RBP19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 PSAT1Q9Y617 370 aa19.58■□□□□ 0.73
PRKCSH-209ENST00000589838 NUP205Q92621 2012 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 JCHAINP01591 159 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 GRK2P25098 689 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 TM4SF4P48230 202 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 CDK7P50613 346 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 CDH17Q12864 832 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 TBCCQ15814 346 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 CCDC153Q494R4 210 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 CES3Q6UWW8 571 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 WDR75Q8IWA0 830 aaKnown RBP19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 FAM13CQ8NE31 585 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 ISL2Q96A47 359 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 MLPHQ9BV36 600 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 SLC17A6Q9P2U8 582 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 PCDHB8Q9UN66 801 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 SNX10Q9Y5X0 201 aa19.58■□□□□ 0.72
PRKCSH-209ENST00000589838 INPPL1O15357 1258 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 IRAK2O43187 625 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 MPOP05164 745 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 IBSPP21815 317 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 CST5P28325 142 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 CCR1P32246 355 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 HADHAP40939 763 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 CSE1LP55060 971 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 RWDD4Q6NW29 188 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 LRRTM3Q86VH5 581 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 OR10T2Q8NGX3 314 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 STN1Q9H668 368 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 FBXO6Q9NRD1 293 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 EMCNQ9ULC0 261 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 SOX13Q9UN79 622 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 HBS1LQ9Y450 684 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 NUMBLQ9Y6R0 609 aa19.57■□□□□ 0.72
PRKCSH-209ENST00000589838 GYG2O15488 501 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 TIMM44O43615 452 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 USP12O75317 370 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 LMNAP02545 664 aaKnown RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 SERPINE1P05121 402 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 LIMK2P53671 638 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 CACNB2Q08289 660 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 EIF4EBP2Q13542 120 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 MBLAC2Q68D91 279 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 C16orf46Q6P387 395 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 STRA8Q7Z7C7 330 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 KLHDC8BQ8IXV7 354 aa19.56■□□□□ 0.72
PRKCSH-209ENST00000589838 PPP4R1Q8TF05 950 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms