RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GOLGA8IPA6NC78 632 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 GOLGA8JA6NMD2 632 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 TULP1O00294 542 aaPredicted RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 NTN3O00634 580 aaPredicted RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 NVLO15381 856 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 AP1G2O75843 785 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 KRT18P05783 430 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 HMBSP08397 361 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 TMEM191BP0C7N4 346 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ALPPL2P10696 532 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 PABPC1P11940 636 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 GOT1P17174 413 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ITIH1P19827 911 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 CMA1P23946 247 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 SLC8A1P32418 973 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 CD70P32970 193 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 PSMD8P48556 350 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 SGSHP51688 502 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 HNRNPA1L2Q32P51 320 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ZNF542PQ5EBM4 170 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 C10orf120Q5SQS8 335 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ZCCHC8Q6NZY4 707 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 SND1Q7KZF4 910 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS25-204ENST00000589577 RAB11FIP2Q7L804 512 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ZC3H18Q86VM9 953 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 GPBP1Q86WP2 473 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 AHI1Q8N157 1196 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ZSCAN1Q8NBB4 408 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 RDH13Q8NBN7 331 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 ZNF548Q8NEK5 533 aaPredicted RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 WFIKKN2Q8TEU8 576 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 KLHDC7BQ96G42 594 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 SMARCD1Q96GM5 515 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 LMLNQ96KR4 655 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 NOX5Q96PH1 765 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 FAM129BQ96TA1 746 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 MYOCQ99972 504 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 OMDQ99983 421 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 STRA6Q9BX79 667 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 SLC4A5Q9BY07 1137 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 CUEDC1Q9NWM3 386 aaPredicted RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 GGA2Q9UJY4 613 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
VPS25-204ENST00000589577 SCML2Q9UQR0 700 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 DMTF1Q9Y222 760 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 SVILO95425 2214 aa6.33□□□□□ -1.4
VPS25-204ENST00000589577 PCSK5Q92824 1860 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 UBE4BO95155 1302 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TNRC6AQ8NDV7 1962 aaKnown RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3DA0A087WVF3 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3IA0A087WXS9 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3EA0A087X179 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3KA0A087X1G2 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3FA6NER0 549 aaPredicted RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 A8MXQ7 604 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TTC34A8MYJ7 566 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3LB9A6J9 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 C9orf172C9J069 976 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 PRAMEF26H0Y7S4 382 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 K7EM74 188 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 PLRG1O43660 514 aaKnown RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 MAGEC1O60732 1142 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 FAM13AO94988 1023 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 CYBBP04839 570 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3HP0C7X1 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 CCDC130P13994 396 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 PFKFB1P16118 471 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 NR1D1P20393 614 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 ETV5P41161 510 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 MAP3K7CLP57077 242 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 SFSWAPQ12872 951 aaKnown RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 STAT4Q14765 748 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 ARID5BQ14865 1188 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 RESP18Q5W5W9 173 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3GQ6DHY5 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3CQ6IPX1 549 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 SV2BQ7L1I2 683 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TRIM69Q86WT6 500 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D3Q8IZP1 549 aaPredicted RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 FBXO39Q8N4B4 442 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 PDILTQ8N807 584 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 ABHD17AQ96GS6 310 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 CLIC6Q96NY7 704 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 CBWD1Q9BRT8 395 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 DUSP23Q9BVJ7 150 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 FOXP3Q9BZS1 431 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 FBXO44Q9H4M3 255 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 EPB41L5Q9HCM4 733 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 PREBQ9HCU5 417 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 GPR27Q9NS67 375 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 BLOC1S4Q9NUP1 217 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 SEPT10Q9P0V9 454 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 PISDQ9UG56 409 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 SUN2Q9UH99 717 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 KLF15Q9UIH9 416 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 RABGEF1Q9UJ41 708 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms