RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SRRM1Q8IYB3 904 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 SLC39A11Q8N1S5 342 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 ATPAF2Q8N5M1 289 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 ATP6V0D2Q8N8Y2 350 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 HDAC11Q96DB2 347 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 XPO6Q96QU8 1125 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 HERC2P3Q9BVR0 1158 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 EPN3Q9H201 632 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 ACSS3Q9H6R3 686 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 KCNK9Q9NPC2 374 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 PPANQ9NQ55 473 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 EIF2B3Q9NR50 452 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 EURLQ9NYK6 297 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 CLIC5Q9NZA1 410 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 PSMC3IPQ9P2W1 217 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 ZC3H7BQ9UGR2 993 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 RSPH14Q9UHP6 348 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 MAGED2Q9UNF1 606 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 BACE2Q9Y5Z0 518 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 HS3ST4Q9Y661 456 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 MRPL42Q9Y6G3 142 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 SLC12A8A0AV02 714 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 FAM92AA1XBS5 289 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TRIM43BA6NCK2 446 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TBX18O95935 607 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 EFEMP2O95967 443 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 SOD2P04179 222 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 GSTA2P09210 222 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 ACRP10323 421 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 BRAFP15056 766 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 CSF2RAP15509 400 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 LAG3P18627 525 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 ATF6P18850 670 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 KRT15P19012 456 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 STX2P32856 288 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 MSH2P43246 934 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 WDR5P61964 334 aaKnown RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 CDK16Q00536 496 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 NRG1Q02297 640 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 CBLBQ13191 982 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 BTG3Q14201 252 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TRIP4Q15650 581 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 ZSCAN26Q16670 478 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 PIK3R6Q5UE93 754 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 ITPRIPL1Q6GPH6 555 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 SLC8B1Q6J4K2 584 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 PID1Q7Z2X4 250 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 MIB1Q86YT6 1006 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 CMTR2Q8IYT2 770 aaKnown RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 RNF168Q8IYW5 571 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 ANKRD42Q8N9B4 389 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 MGARPQ8TDB4 240 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 BCAS4Q8TDM0 211 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 USP33Q8TEY7 942 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TOP1MTQ969P6 601 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TRIM43Q96BQ3 446 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 CENPTQ96BT3 561 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 LRRC39Q96DD0 335 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 SLC39A13Q96H72 371 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TMEM169Q96HH4 297 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 FAM161BQ96MY7 647 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 CYTH2Q99418 400 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 PAFAH2Q99487 392 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 EBNA1BP2Q99848 306 aaKnown RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TRABDQ9H4I3 376 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 INTS9Q9NV88 658 aaKnown RBP8.98□□□□□ -0.97
SMAD4-206ENST00000588860 MARCH2Q9P0N8 246 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 IGSF9Q9P2J2 1179 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 FETUBQ9UGM5 382 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TRHDEQ9UKU6 1024 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 TTLL3Q9Y4R7 772 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 MAD1L1Q9Y6D9 718 aa8.98□□□□□ -0.97
SMAD4-206ENST00000588860 MUC3AQ02505 3323 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 TCRBV9S1A1TA0A576 114 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 TMEM120BA0PK00 339 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SRRM3A6NNA2 597 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 RASA4BC9J798 803 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 KIAA0355O15063 1070 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ZBTB24O43167 697 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 RASA4O43374 803 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 EFCAB14O75071 495 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SEC24AO95486 1093 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 JCHAINP01591 159 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ZDHHC11BP0C7U3 371 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MLNP12872 115 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 RAG1P15918 1043 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CREB1P16220 341 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ITGB8P26012 769 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MGAT1P26572 445 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 GRIA1P42261 906 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MAGEA3P43357 314 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 TUFMP49411 452 aaKnown RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SESN2P58004 480 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ZBTB17Q13105 803 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SPARCL1Q14515 664 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MS4A13Q5J8X5 152 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CASC4Q6P4E1 433 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 LRRC8BQ6P9F7 803 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms