RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 RWDD2BP57060 319 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 GEMIN4P57678 1058 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 TAS2R40P59535 323 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 ST8SIA6P61647 398 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 LMAN2Q12907 356 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 POLD3Q15054 466 aaPredicted RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 GEN1Q17RS7 908 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 SMTNL2Q2TAL5 461 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 ALFQ53S48 1182 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 HS1BP3Q53T59 392 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 TMEM31Q5JXX7 168 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 RNF219Q5W0B1 726 aaPredicted RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 CXorf57Q6NSI4 855 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 TMCO3Q6UWJ1 677 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 BZW1Q7L1Q6 419 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 C12orf40Q86WS4 652 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 KATNAL2Q8IYT4 538 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 UMODL1-AS1Q8N2C9 162 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 PYROXD2Q8N2H3 581 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 EXD1Q8NHP7 514 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 TSC1Q92574 1164 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 RBM41Q96IZ5 413 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 LMLNQ96KR4 655 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 CSPG4P5Q96PW8 444 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 KCTD15Q96SI1 283 aaPredicted RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 FEM1AQ9BSK4 669 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 CALN1Q9BXU9 219 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 MUC3BQ9H195 1237 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 KCNF1Q9H3M0 494 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 PCDH18Q9HCL0 1135 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 LZTFL1Q9NQ48 299 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 GPATCH2LQ9NWQ4 482 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 MPP6Q9NZW5 540 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 CWC15Q9P013 229 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 EFR3BQ9Y2G0 817 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 OR51B4Q9Y5P0 310 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 SNX10Q9Y5X0 201 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 RAD54BQ9Y620 910 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 TCF4P15884 667 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 GOT1P17174 413 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 ERCC2P18074 760 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 MX2P20592 715 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 IL4RP24394 825 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 NTSR1P30989 418 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CD70P32970 193 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 GGCXP38435 758 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CSKP41240 450 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 KIR2DL1P43626 348 aaPredicted RBP9.3□□□□□ -0.92
CIRBP-218ENST00000588344 ECT2LQ008S8 904 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 GNA12Q03113 381 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 KDSRQ06136 332 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 FZD5Q13467 585 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 DPYSQ14117 519 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 TFDP2Q14188 446 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 DPYSL3Q14195 570 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CA9Q16790 459 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 PLEKHG6Q3KR16 790 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 FSCBQ5H9T9 825 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 PITRM1Q5JRX3 1037 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 EOGTQ5NDL2 527 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 ARTNQ5T4W7 220 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 TMCO4Q5TGY1 634 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 DAB2IPQ5VWQ8 1189 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 MBLAC2Q68D91 279 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 TXNRD3NBQ6F5E7 133 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 RETSATQ6NUM9 610 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 TFAP2DQ7Z6R9 452 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 NT5DC3Q86UY8 548 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 ADIPOR2Q86V24 386 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CIR1Q86X95 450 aaPredicted RBP9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CCDC105Q8IYK2 499 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 SPEM1Q8N4L4 309 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 DCAF4L2Q8NA75 395 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.3□□□□□ -0.92
CIRBP-218ENST00000588344 USP33Q8TEY7 942 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CASKIN2Q8WXE0 1202 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 P2RY11Q96G91 374 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 PRRX2Q99811 253 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 ACE2Q9BYF1 805 aaPredicted RBP9.3□□□□□ -0.92
CIRBP-218ENST00000588344 FOXQ1Q9C009 403 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CIPCQ9C0C6 399 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CHRDQ9H2X0 955 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 KCND1Q9NSA2 647 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 THAP10Q9P2Z0 257 aaPredicted RBP9.3□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF212Q9UDV6 495 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 TRIM10Q9UDY6 481 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 SUN2Q9UH99 717 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 VPS28Q9UK41 221 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 CLEC4EQ9ULY5 219 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 MTF2Q9Y483 593 aaPredicted RBP9.3□□□□□ -0.92
CIRBP-218ENST00000588344 DENND4CQ5VZ89 1909 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 OBSL1O75147 1896 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
CIRBP-218ENST00000588344 BDP1A6H8Y1 2624 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 LRRD1A4D1F6 860 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ARHGAP42A6NI28 874 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 PRRT4C9JH25 899 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 TRIM24O15164 1050 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 KDELR3O43731 214 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms