RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PDGFRAP16234 1089 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 GOT1P17174 413 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 C5AR1P21730 350 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 CCR1P32246 355 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 USP8P40818 1118 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 STK19P49842 368 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-206ENST00000588300 CCR5P51681 352 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 OXCT1P55809 520 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 PITX1P78337 314 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-206ENST00000588300 IL9RQ01113 521 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 EIF4EBP2Q13542 120 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-206ENST00000588300 ELAVL3Q14576 367 aaKnown RBP16.43■□□□□ 0.22
ERCC1-206ENST00000588300 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 AADATQ8N5Z0 425 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 PTPRN2Q92932 1015 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 RNF34Q969K3 372 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 PRMT1Q99873 361 aaKnown RBP16.43■□□□□ 0.22
ERCC1-206ENST00000588300 AASDHPPTQ9NRN7 309 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 ASNSD1Q9NWL6 643 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 DDIT4Q9NX09 232 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 APEX2Q9UBZ4 518 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
ERCC1-206ENST00000588300 COL5A1P20908 1838 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-206ENST00000588300 FREM2Q5SZK8 3169 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 SYNJ2BP-COX16A0A087WUM0 186 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 BECN2A8MW95 431 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 IL1BP01584 269 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 MZF1P28698 734 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-206ENST00000588300 CD38P28907 300 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 ADPRHP54922 357 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 KCNJ12Q14500 433 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 TAF5Q15542 800 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 EFHC1Q5JVL4 640 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 GBP6Q6ZN66 633 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 CIR1Q86X95 450 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-206ENST00000588300 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 DEFB106AQ8N104 65 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 OR14C36Q8NHC7 312 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 MDM1Q8TC05 714 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 PPP1R13BQ96KQ4 1090 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 NOX5Q96PH1 765 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 SLC2A13Q96QE2 648 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 CPXM1Q96SM3 734 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 ELF4Q99607 663 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-206ENST00000588300 EBF2Q9HAK2 575 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 COX16Q9P0S2 106 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 FTSJ1Q9UET6 329 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 RWDD2AQ9UIY3 292 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 CACNA1GO43497 2377 aa16.42■□□□□ 0.22
ERCC1-206ENST00000588300 ADAMTS20P59510 1910 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 C10orf142B7Z368 130 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 HSF2BPO75031 334 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 WNT1P04628 370 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 SLC9A1P19634 815 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 NUMBP49757 651 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 PLK1P53350 603 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 MTA1Q13330 715 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 EXOC3L4Q17RC7 722 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 SLC45A4Q5BKX6 768 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 PASD1Q8IV76 773 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 SHC3Q92529 594 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 RPRD1AQ96P16 312 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-206ENST00000588300 SPAG5Q96R06 1193 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 SLC25A13Q9UJS0 675 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 GPSM3Q9Y4H4 160 aa16.41■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3DA0A087WVF3 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3IA0A087WXS9 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3EA0A087X179 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3KA0A087X1G2 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3FA6NER0 549 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3LB9A6J9 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 YKT6O15498 198 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 GRAP2O75791 330 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3HP0C7X1 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 VAV1P15498 845 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-206ENST00000588300 SNX16P57768 344 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 CCDC157Q569K6 752 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3GQ6DHY5 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 SMYD5Q6GMV2 418 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 OR6B2Q6IFH4 312 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3CQ6IPX1 549 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 CXorf57Q6NSI4 855 aaKnown RBP16.4■□□□□ 0.22
ERCC1-206ENST00000588300 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 C11orf57Q6ZUT1 292 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-206ENST00000588300 DSG4Q86SJ6 1040 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 GATAD2AQ86YP4 633 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 TBC1D3Q8IZP1 549 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-206ENST00000588300 WDTC1Q8N5D0 677 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 OR8D1Q8WZ84 308 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 SERAC1Q96JX3 654 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 DKK4Q9UBT3 224 aa16.4■□□□□ 0.22
ERCC1-206ENST00000588300 A0A1W2PR77 199 aa16.39■□□□□ 0.21
ERCC1-206ENST00000588300 GTPBP10A4D1E9 387 aaKnown RBP16.39■□□□□ 0.21
ERCC1-206ENST00000588300 ITGAVP06756 1048 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms