RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 ADPRHP54922 357 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 PITX1P78337 314 aaPredicted RBP17.35■□□□□ 0.37
LINC01842-201ENST00000588275 KCNJ12Q14500 433 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 ARID5BQ14865 1188 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 TRIM59Q8IWR1 403 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 ATP6V0D2Q8N8Y2 350 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 PTPRN2Q92932 1015 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 RNF34Q969K3 372 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 LRIG1Q96JA1 1093 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 SERAC1Q96JX3 654 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 CNDP2Q96KP4 475 aaKnown RBP17.35■□□□□ 0.37
LINC01842-201ENST00000588275 FAM129BQ96TA1 746 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 ACP6Q9NPH0 428 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 GDF3Q9NR23 364 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 ADAMTS1Q9UHI8 967 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 SLC12A6Q9UHW9 1150 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 CYTH4Q9UIA0 394 aa17.35■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3DA0A087WVF3 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3IA0A087WXS9 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3EA0A087X179 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3KA0A087X1G2 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3FA6NER0 549 aaPredicted RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3LB9A6J9 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 PLK4O00444 970 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 ENC1O14682 589 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 LDOC1O95751 146 aaPredicted RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 GNA14O95837 355 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3HP0C7X1 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 C5AR1P21730 350 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 MZF1P28698 734 aaPredicted RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 USP8P40818 1118 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 RPL34P49207 117 aaKnown RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 CLDN6P56747 220 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 PPP2CBP62714 309 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 YWHAZP63104 245 aaKnown RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 PPP2CAP67775 309 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 PAK1Q13153 545 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 DNAJC3Q13217 504 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 SMAD1Q15797 465 aaKnown RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 SLC45A4Q5BKX6 768 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3GQ6DHY5 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3CQ6IPX1 549 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 TBC1D3Q8IZP1 549 aaPredicted RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 CCAR2Q8N163 923 aaKnown RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 EID2Q8N6I1 236 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 MED15Q96RN5 788 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 SRRTQ9BXP5 876 aaKnown RBP17.34■□□□□ 0.37
LINC01842-201ENST00000588275 SLC4A5Q9BY07 1137 aa17.34■□□□□ 0.37
LINC01842-201ENST00000588275 KCNU1A8MYU2 1149 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 BMP6P22004 513 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 MAT2AP31153 395 aaKnown RBP17.33■□□□□ 0.36
LINC01842-201ENST00000588275 CCR5P51681 352 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 PDCLQ13371 301 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 ELAVL3Q14576 367 aaKnown RBP17.33■□□□□ 0.36
LINC01842-201ENST00000588275 TAF5Q15542 800 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 ARHGAP44Q17R89 818 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 POM121L1PQ3SYA9 428 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 ACCSLQ4AC99 568 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 RABGAP1LQ5R372 815 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 GJB7Q6PEY0 223 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 BEND5Q7L4P6 421 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 PDCD7Q8N8D1 485 aaKnown RBP17.33■□□□□ 0.36
LINC01842-201ENST00000588275 STK32AQ8WU08 396 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 ZNF606Q8WXB4 792 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 DCBLD2Q96PD2 775 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 THAP9Q9H5L6 903 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC01842-201ENST00000588275 DDIT4Q9NX09 232 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 CNTN6Q9UQ52 1028 aa17.33■□□□□ 0.36
LINC01842-201ENST00000588275 A0A1W2PR77 199 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 BNIP3LO60238 219 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 RFPL3O75679 317 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 GRAP2O75791 330 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 IGLV3-25P01717 112 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 EPHA8P29322 1005 aaPredicted RBP17.32■□□□□ 0.36
LINC01842-201ENST00000588275 ARRB1P49407 418 aaPredicted RBP17.32■□□□□ 0.36
LINC01842-201ENST00000588275 METAP1P53582 386 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 CDK17Q00537 523 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 CENPCQ03188 943 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 SULT2A1Q06520 285 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 CAMK2BQ13554 666 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 SLC12A1Q13621 1099 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 MORC3Q14149 939 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 SHBQ15464 509 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 TMEM110Q86TL2 294 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 DEFB106AQ8N104 65 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 SAP25Q8TEE9 199 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 OR8D1Q8WZ84 308 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 RPRD1AQ96P16 312 aaPredicted RBP17.32■□□□□ 0.36
LINC01842-201ENST00000588275 SPAG5Q96R06 1193 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 CRACR2AQ9BSW2 395 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 DKK4Q9UBT3 224 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 SLC25A13Q9UJS0 675 aa17.32■□□□□ 0.36
LINC01842-201ENST00000588275 COL5A1P20908 1838 aaPredicted RBP17.32■□□□□ 0.36
LINC01842-201ENST00000588275 URB1O60287 2271 aaKnown RBP17.32■□□□□ 0.36
LINC01842-201ENST00000588275 FASNP49327 2511 aaKnown RBP17.31■□□□□ 0.36
LINC01842-201ENST00000588275 A0A1B0GVM2 712 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms