RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 C7P10643 843 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 CCR1P32246 355 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 CTSKP43235 329 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 RACK1P63244 317 aaKnown RBP17.47■□□□□ 0.39
TMED1-203ENST00000588259 CENPCQ03188 943 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 ARID5BQ14865 1188 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 ACCSLQ4AC99 568 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 TTC39BQ5VTQ0 682 aaPredicted RBP17.47■□□□□ 0.39
TMED1-203ENST00000588259 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 CCNI2Q6ZMN8 369 aaPredicted RBP17.47■□□□□ 0.39
TMED1-203ENST00000588259 OR2T34Q8NGX1 318 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 CPXM1Q96SM3 734 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 CCDC86Q9H6F5 360 aaKnown RBP17.47■□□□□ 0.39
TMED1-203ENST00000588259 FTSJ1Q9UET6 329 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 FZD4Q9ULV1 537 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 LHX6Q9UPM6 363 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 ASPMQ8IZT6 3477 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 ZFHX4Q86UP3 3567 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 ITIH6Q6UXX5 1313 aa17.47■□□□□ 0.39
TMED1-203ENST00000588259 SPEGQ15772 3267 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 APC2O95996 2303 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 A0A1B0GVM2 712 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 A0A1W2PPC4 97 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 TCAF2A6NFQ2 919 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 VILLO15195 856 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 VAV1P15498 845 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 GOT1P17174 413 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 C5AR1P21730 350 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 MZF1P28698 734 aaPredicted RBP17.46■□□□□ 0.39
TMED1-203ENST00000588259 KRT9P35527 623 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 GGCXP38435 758 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 PTK2Q05397 1052 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 SULT2A1Q06520 285 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 ELAVL3Q14576 367 aaKnown RBP17.46■□□□□ 0.39
TMED1-203ENST00000588259 EFHC1Q5JVL4 640 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 PRAMEF14Q5SWL7 426 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 FAM183BPQ6ZVS7 135 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 SND1Q7KZF4 910 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■■■□ 23.4
TMED1-203ENST00000588259 PROSER1Q86XN7 944 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 AADATQ8N5Z0 425 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 C1orf131Q8NDD1 294 aaKnown RBP17.46■□□□□ 0.39
TMED1-203ENST00000588259 BAHD1Q8TBE0 780 aaPredicted RBP17.46■□□□□ 0.39
TMED1-203ENST00000588259 KIAA1468Q9P260 1216 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 SLC25A13Q9UJS0 675 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 VANGL2Q9ULK5 521 aa17.46■□□□□ 0.39
TMED1-203ENST00000588259 TNFSF14O43557 240 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 BNIP3LO60238 219 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 PCDHGA12O60330 932 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 GLI1P08151 1106 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 ADPRHP54922 357 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 OXCT1P55809 520 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 SNX16P57768 344 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 SLC12A1Q13621 1099 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 POM121L1PQ3SYA9 428 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.45■□□□□ 0.38
TMED1-203ENST00000588259 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
TMED1-203ENST00000588259 DSG4Q86SJ6 1040 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 GATAD2AQ86YP4 633 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 SHC3Q92529 594 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 SERAC1Q96JX3 654 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 SLC2A13Q96QE2 648 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 FAM129BQ96TA1 746 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 ORAI3Q9BRQ5 295 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 PDCL3Q9H2J4 239 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 ADAMTS1Q9UHI8 967 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 VPS28Q9UK41 221 aa17.45■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3DA0A087WVF3 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3KA0A087X1G2 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 FAM170AA1A519 330 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3FA6NER0 549 aaPredicted RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3LB9A6J9 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 PLK4O00444 970 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 DFNA5O60443 496 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 ERBB2P04626 1255 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3HP0C7X1 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 PNMA6AP0CW24 399 aaPredicted RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 PON1P27169 355 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 ZNF177Q13360 481 aaPredicted RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 AUHQ13825 339 aaKnown RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 KCNJ12Q14500 433 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3GQ6DHY5 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3CQ6IPX1 549 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 FBXL22Q6P050 247 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 DBX2Q6ZNG2 339 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 MARCH9Q86YJ5 346 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TBC1D3Q8IZP1 549 aaPredicted RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 MDM1Q8TC05 714 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 OR8D1Q8WZ84 308 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 PTPRN2Q92932 1015 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 SPAG5Q96R06 1193 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 PPP1R9BQ96SB3 815 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 PRMT1Q99873 361 aaKnown RBP17.44■□□□□ 0.38
TMED1-203ENST00000588259 SIK2Q9H0K1 926 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 MUC3BQ9H195 1237 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 PLCB1Q9NQ66 1216 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 ASNSD1Q9NWL6 643 aa17.44■□□□□ 0.38
TMED1-203ENST00000588259 TOR4AQ9NXH8 423 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms