RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GUCY2DQ02846 1103 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 PDK1Q15118 436 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 PPP1R7Q15435 360 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 BZW1Q7L1Q6 419 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 CHST9Q7L1S5 443 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 GSTA5Q7RTV2 222 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 UMODL1-AS1Q8N2C9 162 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 GPR161Q8N6U8 529 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 CELF5Q8N6W0 485 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 FAM71DQ8N9W8 422 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 TDRD5Q8NAT2 981 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 HJURPQ8NCD3 748 aaPredicted RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 TFB1MQ8WVM0 346 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 RSAD2Q8WXG1 361 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 SMARCD2Q92925 531 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 HDAC11Q96DB2 347 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 RIPOR3Q96MK2 946 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 PARD6BQ9BYG5 372 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 TRIM31Q9BZY9 425 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 POMKQ9H5K3 350 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 KIF9Q9HAQ2 790 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 EPB41L5Q9HCM4 733 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 GDF3Q9NR23 364 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 CDH7Q9ULB5 785 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 WNT6Q9Y6F9 365 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 A0A1B0GVM2 712 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 CFAP69A5D8W1 941 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 TCAF2A6NFQ2 919 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 RASA4BC9J798 803 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 NCAM2O15394 837 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 RASA4O43374 803 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 CLDN11O75508 207 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 GAS8O95995 478 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 IFNB1P01574 187 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 MX2P20592 715 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 OR1E1P30953 314 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 ACVRL1P37023 503 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 MTHFRP42898 656 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 VPS41P49754 854 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 NUMBP49757 651 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 PAPOLAP51003 745 aaKnown RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 NDST2P52849 883 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 VSNL1P62760 191 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 LMNB2Q03252 620 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 PPIDQ08752 370 aaKnown RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 AP1B1Q10567 949 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 CCDC85BQ15834 202 aaPredicted RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 MPPE1Q53F39 396 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 TTC39BQ5VTQ0 682 aaPredicted RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 DUPD1Q68J44 220 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 CXorf57Q6NSI4 855 aaKnown RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 TPGS1Q6ZTW0 290 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 SYDE1Q6ZW31 735 aaPredicted RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 CARNMT1Q8N4J0 409 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 SMRP1Q8NCR6 262 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 CCNYQ8ND76 341 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 WFDC5Q8TCV5 224 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 HTR3CQ8WXA8 447 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 BHMTQ93088 406 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 HMCESQ96FZ2 354 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 ERP44Q9BS26 406 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 LINC00597Q9H2U6 94 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 PCDH9Q9HC56 1237 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 GDE1Q9NZC3 331 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 FEZ2Q9UHY8 353 aaPredicted RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 SNX24Q9Y343 169 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 MYO9BQ13459 2157 aa11.59□□□□□ -0.55
VMP1-207ENST00000588131 KIF26AQ9ULI4 1882 aaPredicted RBP11.59□□□□□ -0.55
VMP1-207ENST00000588131 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 GRXCR2A6NFK2 248 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 HEPACAM2A8MVW5 462 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 H3BQ06 376 aaPredicted RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 KCNK1O00180 336 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 MAFKO60675 156 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 RAMP2O60895 175 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 RHOCP08134 193 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 IVDP26440 423 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 HOXD9P28356 352 aaPredicted RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 STIP1P31948 543 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 RPL22P35268 128 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 CHKAP35790 457 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 RPL21P46778 160 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 ZNF177Q13360 481 aaPredicted RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 FSCBQ5H9T9 825 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 FYB2Q5VWT5 728 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 TMEM25Q86YD3 366 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 GSPT2Q8IYD1 628 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 CCDC13Q8IYE1 715 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 ATPAF2Q8N5M1 289 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 CCDC89Q8N998 374 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 OR7D4Q8NG98 312 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 BPIFB1Q8TDL5 484 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 DDI1Q8WTU0 396 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms