RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TCF7L2Q9NQB0 619 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 VANGL2Q9ULK5 521 aa19■□□□□ 0.63
DDX39A-206ENST00000587730 RALGAPA2Q2PPJ7 1873 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 PSMD3O43242 534 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 PEX10O60683 326 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 ERVK-10P10266 1014 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 VCLP18206 1134 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 GLDCP23378 1020 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 ADORA2BP29275 332 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 CRADDP78560 199 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 DPYSQ14117 519 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 MMEL1Q495T6 779 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 ANKRD20A4Q4UJ75 823 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 NOTUMQ6P988 496 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 PID1Q7Z2X4 250 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 STRA8Q7Z7C7 330 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 FAM131BQ86XD5 332 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 RP9Q8TA86 221 aaKnown RBP18.99■□□□□ 0.63
DDX39A-206ENST00000587730 SLC7A14Q8TBB6 771 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 KCTD13Q8WZ19 329 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 NTAN1Q96AB6 310 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 PRDM12Q9H4Q4 367 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 NMRAL1Q9HBL8 299 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 CASS4Q9NQ75 786 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 KLHL8Q9P2G9 620 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-206ENST00000587730 PSMD13Q9UNM6 376 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 RAP2CQ9Y3L5 183 aa18.99■□□□□ 0.63
DDX39A-206ENST00000587730 A0A096LPK6 155 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 RBM47A0AV96 593 aaKnown RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 RGSL1A5PLK6 1076 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 EEF2KO00418 725 aaKnown RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 DCXO43602 365 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 ZCCHC18P0CG32 403 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 COL6A2P12110 1019 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 RAG1P15918 1043 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 HSPA13P48723 471 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 ATXN1P54253 815 aaKnown RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 TRIP10Q15642 601 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 OGFRL1Q5TC84 451 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 FRMD7Q6ZUT3 714 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 FASTKD5Q7L8L6 764 aaKnown RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 RSPH3Q86UC2 560 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 DEFB106AQ8N104 65 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 GPC2Q8N158 579 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 CPSF7Q8N684 471 aaKnown RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 PHC3Q8NDX5 983 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 CLEC4CQ8WTT0 213 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 LRRN4Q8WUT4 740 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 DLG3Q92796 817 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 ZNF669Q96BR6 464 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-206ENST00000587730 NPY6RQ99463 290 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 IL22Q9GZX6 179 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 HACD3Q9P035 362 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 RBPJLQ9UBG7 517 aa18.98■□□□□ 0.63
DDX39A-206ENST00000587730 HDAC3O15379 428 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 RNASEH1O60930 286 aaKnown RBP18.97■□□□□ 0.63
DDX39A-206ENST00000587730 FBXO21O94952 628 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 RTN3O95197 1032 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-206ENST00000587730 AXLP30530 894 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 GSTT1P30711 240 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 CHN2P52757 468 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 SCAPQ12770 1279 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 SV2CQ496J9 727 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 PPM1JQ5JR12 505 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 RARS2Q5T160 578 aaKnown RBP18.97■□□□□ 0.63
DDX39A-206ENST00000587730 BSPRYQ5W0U4 402 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 FSTL4Q6MZW2 842 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 LIMS2Q7Z4I7 341 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 TDRD5Q8NAT2 981 aaKnown RBP18.97■□□□□ 0.63
DDX39A-206ENST00000587730 KYQ8NBH2 561 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 APPL2Q8NEU8 664 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 URGCPQ8TCY9 931 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 WNT8BQ93098 351 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 HNRNPABQ99729 332 aaKnown RBP18.97■□□□□ 0.63
DDX39A-206ENST00000587730 SETD4Q9NVD3 440 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 SEPT10Q9P0V9 454 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 KCNH4Q9UQ05 1017 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 RRN3P2A6NIE6 340 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 G3V2L1 256 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 PIRO00625 290 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 DCLK1O15075 740 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 DENRO43583 198 aaKnown RBP18.97■□□□□ 0.63
DDX39A-206ENST00000587730 CABYRO75952 493 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 PDE5AO76074 875 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 MLH1P40692 756 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 RAB27AP51159 221 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 PRKAA1Q13131 559 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 ANO4Q32M45 955 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 ALKAL1Q6UXT8 129 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 KBTBD7Q8WVZ9 684 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 FAM149B1Q96BN6 582 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 SLC2A13Q96QE2 648 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 HAPLN3Q96S86 360 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 DUSP16Q9BY84 665 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 DRC3Q9H069 523 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 DPEP3Q9H4B8 488 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 PIDD1Q9HB75 910 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 CYP4F11Q9HBI6 524 aa18.97■□□□□ 0.63
DDX39A-206ENST00000587730 MRPL40Q9NQ50 206 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms