RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 HPDP32754 393 aaPredicted RBP20.33■□□□□ 0.85
TRIM47-204ENST00000587339 IRAK1P51617 712 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 GPX6P59796 221 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 MAGOHP61326 146 aaKnown RBP20.33■□□□□ 0.85
TRIM47-204ENST00000587339 ALFQ53S48 1182 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 AFMIDQ63HM1 303 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 NADSYN1Q6IA69 706 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 ARHGAP36Q6ZRI8 547 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 UMODL1-AS1Q8N2C9 162 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 DPF3Q92784 378 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 IGSF8Q969P0 613 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 XAB2Q9HCS7 855 aaKnown RBP20.33■□□□□ 0.85
TRIM47-204ENST00000587339 LZTS1Q9Y250 596 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 EXOC1LA0A1B0GW35 172 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 DRGXA6NNA5 263 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 ZBTB24O43167 697 aaPredicted RBP20.33■□□□□ 0.84
TRIM47-204ENST00000587339 MAFKO60675 156 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 CNTN5O94779 1100 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 OAS1P00973 400 aaKnown RBP20.33■□□□□ 0.84
TRIM47-204ENST00000587339 AGTP01019 485 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 SLC11A2P49281 568 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 ERVFC1P60507 584 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 ITPRIPL1Q6GPH6 555 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 ZNF534Q76KX8 674 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 LRRC49Q8IUZ0 686 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 PLD4Q96BZ4 506 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 TLCD1Q96CP7 247 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 KLHL5Q96PQ7 755 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 LBHD1Q9BQE6 289 aaPredicted RBP20.33■□□□□ 0.84
TRIM47-204ENST00000587339 EMILIN2Q9BXX0 1053 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 RNF38Q9H0F5 515 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 RSPH14Q9UHP6 348 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 ASB3Q9Y575 518 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 IRAK3Q9Y616 596 aa20.33■□□□□ 0.84
TRIM47-204ENST00000587339 NUP205Q92621 2012 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 GOLGA6L7A0A1B0GV03 622 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 ACSL4O60488 711 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 CDH16O75309 829 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 JCHAINP01591 159 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 CCNB1P14635 433 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 MAGEA3P43357 314 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 PAPOLAP51003 745 aaKnown RBP20.32■□□□□ 0.84
TRIM47-204ENST00000587339 NDST2P52849 883 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 PABPC1LQ4VXU2 614 aaKnown RBP20.32■□□□□ 0.84
TRIM47-204ENST00000587339 TIGD7Q6NT04 549 aaPredicted RBP20.32■□□□□ 0.84
TRIM47-204ENST00000587339 LILRA6Q6PI73 481 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 CCDC149Q6ZUS6 474 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 TMEM150AQ86TG1 271 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 IGDCC3Q8IVU1 814 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 ZSCAN18Q8TBC5 510 aaPredicted RBP20.32■□□□□ 0.84
TRIM47-204ENST00000587339 LRRC39Q96DD0 335 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 TEKT5Q96M29 485 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 HTATIP2Q9BUP3 242 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 GBA3Q9H227 469 aa20.32■□□□□ 0.84
TRIM47-204ENST00000587339 F5H5T6 163 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 MATN3O15232 486 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 CSPG5O95196 566 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 LRG1P02750 347 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 TSHRP16473 764 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 TACR2P21452 398 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 GRIA1P42261 906 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 KDM7AQ6ZMT4 941 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 AGGF1Q8N302 714 aaeCLIP20.31■□□□□ 0.84
TRIM47-204ENST00000587339 NOL6Q9H6R4 1146 aaKnown RBP20.31■□□□□ 0.84
TRIM47-204ENST00000587339 ZNF334Q9HCZ1 680 aaPredicted RBP20.31■□□□□ 0.84
TRIM47-204ENST00000587339 GKN1Q9NS71 199 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 RWDD3Q9Y3V2 267 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 PLXNA4Q9HCM2 1894 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 ARHGAP42A6NI28 874 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 STC2O76061 302 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 F11P03951 625 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 MLNP12872 115 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 CD68P34810 354 aaPredicted RBP20.31■□□□□ 0.84
TRIM47-204ENST00000587339 ATP1A2P50993 1020 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 IFI35P80217 286 aaPredicted RBP20.31■□□□□ 0.84
TRIM47-204ENST00000587339 EMC10Q5UCC4 262 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 DENND1CQ8IV53 801 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 ARFGAP2Q8N6H7 521 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 CTNNAL1Q9UBT7 734 aa20.31■□□□□ 0.84
TRIM47-204ENST00000587339 IPO11Q9UI26 975 aaKnown RBP20.31■□□□□ 0.84
TRIM47-204ENST00000587339 LINC01553A4QN01 128 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 C8AP07357 584 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 NFKB1P19838 968 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 ATP5DP30049 168 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 TNFAIP8L3Q5GJ75 292 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 PLPP4Q5VZY2 271 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 LGI2Q8N0V4 545 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 MRPL43Q8N983 215 aaKnown RBP20.3■□□□□ 0.84
TRIM47-204ENST00000587339 KREMEN2Q8NCW0 462 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 POF1BQ8WVV4 589 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 IL21Q9HBE4 155 aa20.3■□□□□ 0.84
TRIM47-204ENST00000587339 HIDE1A8MVS5 230 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 POC1B-GALNT4F8VUJ3 575 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 SPAG6O75602 509 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 CPP00450 1065 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 OR1E1P30953 314 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 CORO1AP31146 461 aaKnown RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 FAM133BQ5BKY9 247 aaKnown RBP20.29■□□□□ 0.84
TRIM47-204ENST00000587339 LRRC8BQ6P9F7 803 aa20.29■□□□□ 0.84
TRIM47-204ENST00000587339 RFWD3Q6PCD5 774 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms