RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CCDC130P13994 396 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 DESP17661 470 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 CDH5P33151 784 aaPredicted RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 MAN1A1P33908 653 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 TNFRSF4P43489 277 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 SLC5A3P53794 718 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 NOMO3P69849 1222 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 GAD2Q05329 585 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 INCA1Q0VD86 236 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 DUOXA1Q1HG43 343 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 COL28A1Q2UY09 1125 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 PLEKHG6Q3KR16 790 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 TAF3Q5VWG9 929 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 PEAR1Q5VY43 1037 aaPredicted RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 SPOPLQ6IQ16 392 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 KIAA1324Q6UXG2 1013 aaKnown RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 GPRIN1Q7Z2K8 1008 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 SLCO6A1Q86UG4 719 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 NT5DC3Q86UY8 548 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 FAM35AQ86V20 835 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 CHPFQ8IZ52 775 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 RGL4Q8IZJ4 473 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 TERB1Q8NA31 727 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 B3GALNT2Q8NCR0 500 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 ZMIZ2Q8NF64 920 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 CRELD1Q96HD1 420 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 HES6Q96HZ4 224 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 RUNDC3BQ96NL0 473 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 SLITRK1Q96PX8 696 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 ARID3AQ99856 593 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 SPHK2Q9NRA0 654 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 PARVAQ9NVD7 372 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 DNAJC17Q9NVM6 304 aaKnown RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 OSER1Q9NX31 292 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 WDR35Q9P2L0 1181 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 CNOT8Q9UFF9 292 aaKnown RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 HMGXB4Q9UGU5 601 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 TTC7AQ9ULT0 858 aaPredicted RBP8.13□□□□□ -1.11
VMP1-204ENST00000587259 SH3BP1Q9Y3L3 701 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 SLCO1B1Q9Y6L6 691 aa8.13□□□□□ -1.11
VMP1-204ENST00000587259 CEP192Q8TEP8 1941 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 E2F8A0AVK6 867 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 KCNK3O14649 394 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 SLC9A3R1O14745 358 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 HOXC11O43248 304 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 ATP8B1O43520 1251 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 SPOPO43791 374 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 GREM1O60565 184 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 BUB1BO60566 1050 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 GJB3O75712 270 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 FTCDO95954 541 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 FTH1P19P0C7X4 201 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 VDRP11473 427 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 CTNNA2P26232 953 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 NTSR1P30989 418 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 CETN2P41208 172 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 EIF2DP41214 584 aaKnown RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 GSCP56915 257 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 TRIP6Q15654 476 aaKnown RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 MAPRE1Q15691 268 aaKnown RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 SOWAHCQ53LP3 525 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 HECTD3Q5T447 861 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 SEL1L2Q5TEA6 688 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 BTBD8Q5XKL5 378 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 WDR93Q6P2C0 686 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 TMCO3Q6UWJ1 677 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 MON1BQ7L1V2 547 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 DPH6Q7L8W6 267 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 ACOT1Q86TX2 421 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 UNC93AQ86WB7 457 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 PROSER1Q86XN7 944 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 CREG2Q8IUH2 290 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 MCOLN2Q8IZK6 566 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 NUP93Q8N1F7 819 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 MMGT1Q8N4V1 131 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 SPATA4Q8NEY3 305 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 CCDC26Q8TAB7 109 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 IPO4Q8TEX9 1081 aaKnown RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 MAIP1Q8WWC4 291 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 ZNF606Q8WXB4 792 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.12□□□□□ -1.11
VMP1-204ENST00000587259 CAPZA3Q96KX2 299 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 BBC3Q96PG8 261 aaPredicted RBP8.12□□□□□ -1.11
VMP1-204ENST00000587259 SMOQ99835 787 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 BBS2Q9BXC9 721 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 NT5C1AQ9BXI3 368 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 ACBD3Q9H3P7 528 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 ARFGAP3Q9NP61 516 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 KRT82Q9NSB4 513 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 FAM49BQ9NUQ9 324 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 ADAM22Q9P0K1 906 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 DEC1Q9P2X7 70 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 RAB21Q9UL25 225 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms