RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 GALNT2Q10471 571 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 ZNF177Q13360 481 aaPredicted RBP6.35□□□□□ -1.39
LIG3-206ENST00000586058 CDH18Q13634 790 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 AUHQ13825 339 aaKnown RBP6.35□□□□□ -1.39
LIG3-206ENST00000586058 ZNF235Q14590 738 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 PRKD1Q15139 912 aaPredicted RBP6.35□□□□□ -1.39
LIG3-206ENST00000586058 PARP15Q460N3 678 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 BEND6Q5SZJ8 279 aaPredicted RBP6.35□□□□□ -1.39
LIG3-206ENST00000586058 ALS2CLQ60I27 953 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 TRMT10CQ7L0Y3 403 aaKnown RBP6.35□□□□□ -1.39
LIG3-206ENST00000586058 TMC3Q7Z5M5 1100 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 DENND1CQ8IV53 801 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 TDHQ8IZJ6 230 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 LGI2Q8N0V4 545 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 CNPY4Q8N129 248 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 KRT222Q8N1A0 295 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 FBXO25Q8TCJ0 367 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 ARNTL2Q8WYA1 636 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 ART4Q93070 314 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 AZIN2Q96A70 460 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 RTP4Q96DX8 246 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 SLC39A13Q96H72 371 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 SPATA13Q96N96 652 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 OLFM3Q96PB7 478 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 HINFPQ9BQA5 517 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 FSD1LQ9BXM9 530 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 NKX2-4Q9H2Z4 354 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 PRDM12Q9H4Q4 367 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 KIF9Q9HAQ2 790 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 TMPRSS4Q9NRS4 437 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 RAB6BQ9NRW1 208 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 ETNK2Q9NVF9 386 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 TMEM248Q9NWD8 314 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 SAMD15Q9P1V8 674 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 XPO7Q9UIA9 1087 aaKnown RBP6.35□□□□□ -1.39
LIG3-206ENST00000586058 TTLL3Q9Y4R7 772 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 CPQQ9Y646 472 aa6.35□□□□□ -1.39
LIG3-206ENST00000586058 BRCA2P51587 3418 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 A0A1W2PRU2 124 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 C2orf78A6NCI8 922 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 C5orf60A6NFR6 353 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 HIDE1A8MVS5 230 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 WASH4PA8MWX3 477 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 H0Y626 953 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 SLC9A3R1O14745 358 aaPredicted RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 GRM6O15303 877 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 CLASP2O75122 1294 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 PPFIA2O75334 1257 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 GCATO75600 419 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 SPAG6O75602 509 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ANXA9O76027 345 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 STC2O76061 302 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 TBX18O95935 607 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 APRTP07741 180 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 RHOP08100 348 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 POU2F2P09086 479 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 LINC00271P0C7V0 271 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 MYBL2P10244 700 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 MYOGP15173 224 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 TPSB2P20231 275 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 CA4P22748 312 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 IL4RP24394 825 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 HSPA9P38646 679 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 RENBPP51606 427 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 GDF10P55107 478 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 GEMIN4P57678 1058 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 CDK16Q00536 496 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 TPSAB1Q15661 275 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ANKRD20A2Q5SQ80 823 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ADGRF1Q5T601 910 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 GPR158Q5T848 1215 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 TMCO4Q5TGY1 634 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ANKRD20A1Q5TYW2 823 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 PIK3R6Q5UE93 754 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 MANEALQ5VSG8 457 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ANKRD20A3Q5VUR7 823 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 IL31Q6EBC2 164 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 NAPEPLDQ6IQ20 393 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 HIBCHQ6NVY1 386 aaPredicted RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 LILRA6Q6PI73 481 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 CHST9Q7L1S5 443 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 PID1Q7Z2X4 250 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ANKS1BQ7Z6G8 1248 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 TFAP2DQ7Z6R9 452 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 LINC00523Q86TU6 105 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 RBM23Q86U06 439 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 ZDHHC14Q8IZN3 488 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ZCCHC9Q8N567 271 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 PAF1Q8N7H5 531 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ARL14EPQ8N8R7 260 aaPredicted RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 MAB21L3Q8N8X9 362 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 ATP11CQ8NB49 1132 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 GABPB2Q8TAK5 448 aaPredicted RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 GDPD5Q8WTR4 605 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 SMG7Q92540 1137 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 TIFAQ96CG3 184 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 PABPC5Q96DU9 382 aaKnown RBP6.34□□□□□ -1.39
LIG3-206ENST00000586058 P2RY11Q96G91 374 aa6.34□□□□□ -1.39
LIG3-206ENST00000586058 CELF6Q96J87 481 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms