RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	VANGL2	Q9ULK5	521 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	MYO6	Q9UM54	1294 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	CYP8B1	Q9UNU6	501 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	PLA2G4C	Q9UP65	541 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	ADAMTS9	Q9P2N4	1935 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760		H0Y626	953 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	F9	P00740	461 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	IGLV3-19	P01714	112 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	ASL	P04424	464 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	CFI	P05156	583 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	FER	P16591	822 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	NSF	P46459	744 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	RPL6	Q02878	288 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	PLEKHG6	Q3KR16	790 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZSCAN23	Q3MJ62	389 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	FILIP1L	Q4L180	1135 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	ARTN	Q5T4W7	220 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	SLC36A4	Q6YBV0	504 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	8e-11	■■■□□ 18.4
SREBF1-223	ENST00000584760	MON1B	Q7L1V2	547 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	IRF2BP2	Q7Z5L9	587 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	C14orf80	Q86SX3	495 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	TMPRSS6	Q8IU80	811 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	OR2T3	Q8NH03	318 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	MRGPRX3	Q96LB0	322 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	RPRD1A	Q96P16	312 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	AGPAT1	Q99943	283 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	GTPBP2	Q9BX10	602 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	TTYH3	Q9C0H2	523 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	WDCP	Q9H6R7	721 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	TMEM51	Q9NW97	253 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	PAXBP1	Q9Y5B6	917 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	SPEG	Q15772	3267 aa		13.72	□□□□□ -0.21
SREBF1-223	ENST00000584760	ITIH6	Q6UXX5	1313 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	C2CD4B	A6NLJ0	364 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	LRRC53	A6NM62	1247 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	AP5Z1	O43299	807 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	ENDOD1	O94919	500 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	GJB6	O95452	261 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	PDGFRA	P16234	1089 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	ITPKA	P23677	461 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	RDX	P35241	583 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	CTSO	P43234	321 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	TPMT	P51580	245 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	ATXN3	P54252	364 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	SEMA3B	Q13214	749 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	SLC12A1	Q13621	1099 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	ARID5B	Q14865	1188 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	NR1I3	Q14994	352 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	LYSMD4	Q5XG99	296 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	E4F1	Q66K89	784 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	PHLDB2	Q86SQ0	1253 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	PIP4P1	Q86T03	277 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	CACUL1	Q86Y37	369 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	APCDD1	Q8J025	514 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	CHCHD4	Q8N4Q1	142 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	DEFB119	Q8N690	84 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	KDM1B	Q8NB78	822 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	C3orf20	Q8ND61	904 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	OR52K2	Q8NGK3	314 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	JOSD2	Q8TAC2	188 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	PRCC	Q92733	491 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	SIPA1	Q96FS4	1042 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	FBRS	Q9HAH7	460 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	PRSS16	Q9NQE7	514 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	TMPRSS4	Q9NRS4	437 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	ADAM22	Q9P0K1	906 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	ERVW-1	Q9UQF0	538 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	SNX10	Q9Y5X0	201 aa		13.71	□□□□□ -0.21
SREBF1-223	ENST00000584760	AKAP13	Q12802	2813 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	IGLV3-10	A0A075B6K4	115 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	TCRBV5S1A1T	A0A578	114 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	TAF4	O00268	1085 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	MOCS3	O95396	460 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	CALB1	P05937	261 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	SRPRA	P08240	638 aa	Known RBP	13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	CCDC172	P0C7W6	258 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	MZF1	P28698	734 aa	Predicted RBP	13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	CD6	P30203	668 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	PTPN9	P43378	593 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	PLK1	P53350	603 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	FAM193A	P78312	1265 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	ATP11A	P98196	1134 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	C1QBP	Q07021	282 aa	Known RBP	13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	CCDC14	Q49A88	953 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	RAB6C	Q53S08	254 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	ALF	Q53S48	1182 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	SLC23A3	Q6PIS1	610 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	FAM131B	Q86XD5	332 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	SLC41A1	Q8IVJ1	513 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	HDDC3	Q8N4P3	179 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	RXFP2	Q8WXD0	754 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	ALG14	Q96F25	216 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	C1orf74	Q96LT6	269 aa		13.7	□□□□□ -0.22
SREBF1-223	ENST00000584760	SIK2	Q9H0K1	926 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms