RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CELF6Q96J87 481 aaKnown RBP14.35□□□□□ -0.11
UBBP4-202ENST00000584755 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
UBBP4-202ENST00000584755 DDX50Q9BQ39 737 aaKnown RBP14.35□□□□□ -0.11
UBBP4-202ENST00000584755 PRKD2Q9BZL6 878 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 EPB41L4BQ9H329 900 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 CPQQ9Y646 472 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 NOTCH4Q99466 2003 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 TRANK1O15050 2925 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 NUP205Q92621 2012 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 EPOPA6NHQ4 379 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 MAFKO60675 156 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 TMEM63AO94886 807 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 METTL18O95568 372 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 RHOP08100 348 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 PTPN3P26045 913 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 HSD17B3P37058 310 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 SEMA5AQ13591 1074 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 PRSS36Q5K4E3 855 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 RABGAP1LQ5R372 815 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 HTR3DQ70Z44 454 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 CHST9Q7L1S5 443 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 LGI2Q8N0V4 545 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 ATPAF2Q8N5M1 289 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 MAB21L3Q8N8X9 362 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 PRICKLE1Q96MT3 831 aaPredicted RBP14.34□□□□□ -0.11
UBBP4-202ENST00000584755 VAT1Q99536 393 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 SLC46A2Q9BY10 475 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 SLC28A3Q9HAS3 691 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 RAB6BQ9NRW1 208 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 SMPD4Q9NXE4 827 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 IGSF9Q9P2J2 1179 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 ARHGAP26Q9UNA1 814 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
UBBP4-202ENST00000584755 NYNRINQ9P2P1 1898 aaKnown RBP14.34□□□□□ -0.11
UBBP4-202ENST00000584755 TCRBV7S3A2A0A539 114 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 CKMP06732 381 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 IRF1P10914 325 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 FDFT1P37268 417 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 PMS2P54278 862 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 CDH4P55283 916 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 YBEYP58557 167 aaPredicted RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 IFI35P80217 286 aaPredicted RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 BASP1P80723 227 aaKnown RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 PARP15Q460N3 678 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TEX44Q53QW1 395 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 STXBP5Q5T5C0 1151 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 RFWD3Q6PCD5 774 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 ARHGAP36Q6ZRI8 547 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 ARHGEF18Q6ZSZ5 1173 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TRMT10CQ7L0Y3 403 aaKnown RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TFAP2DQ7Z6R9 452 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TDHQ8IZJ6 230 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TNS4Q8IZW8 715 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 MAML1Q92585 1016 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 EXOC4Q96A65 974 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TCEAL4Q96EI5 215 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 CDCA3Q99618 268 aaPredicted RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 FRMD8Q9BZ67 464 aaPredicted RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 PABPC3Q9H361 631 aaKnown RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TLE6Q9H808 572 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 ETNK1Q9HBU6 452 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 ZMYM5Q9UJ78 669 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF510Q9Y2H8 683 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 ZFP37Q9Y6Q3 630 aaPredicted RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 HELZP42694 1942 aaKnown RBP14.33□□□□□ -0.12
UBBP4-202ENST00000584755 CHD5Q8TDI0 1954 aa14.33□□□□□ -0.12
UBBP4-202ENST00000584755 RASA4BC9J798 803 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 E7ESA3 106 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 KCNK1O00180 336 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 DFFAO00273 331 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 MATN3O15232 486 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 EIF3HO15372 352 aaKnown RBP eCLIP14.32□□□□□ -0.12
UBBP4-202ENST00000584755 RASA4O43374 803 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 CLDN11O75508 207 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 GJA1P17302 382 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 TPSB2P20231 275 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 PAPOLAP51003 745 aaKnown RBP14.32□□□□□ -0.12
UBBP4-202ENST00000584755 ZBTB17Q13105 803 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 TPSAB1Q15661 275 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 PARP6Q2NL67 630 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 CFAP58Q5T655 872 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 TIGD7Q6NT04 549 aaPredicted RBP14.32□□□□□ -0.12
UBBP4-202ENST00000584755 RBM23Q86U06 439 aaKnown RBP14.32□□□□□ -0.12
UBBP4-202ENST00000584755 KLHDC8BQ8IXV7 354 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 MCUQ8NE86 351 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 DEPDC1BQ8WUY9 529 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 TEKT5Q96M29 485 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 PWWP2AQ96N64 755 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 RBM15Q96T37 977 aaKnown RBP eCLIP14.32□□□□□ -0.122e-7■■■□□ 15.2
UBBP4-202ENST00000584755 IL12RB2Q99665 862 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 ACBD3Q9H3P7 528 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
UBBP4-202ENST00000584755 CCDC195A0A1B0GUA6 201 aa14.31□□□□□ -0.12
UBBP4-202ENST00000584755 A0A1B0GVM2 712 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms