RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 DUPD1Q68J44 220 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 POLR1BQ9H9Y6 1135 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 INVSQ9Y283 1065 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
RNF43-208ENST00000584437 ADGRB3O60242 1522 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 H3BN98 237 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 IDH3BO43837 385 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 SNRPB2P08579 225 aaKnown RBP13.28□□□□□ -0.28
RNF43-208ENST00000584437 CCR1P32246 355 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 ATP12AP54707 1039 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 PSME3P61289 254 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 MILR1Q7Z6M3 343 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 PCDH20Q8N6Y1 951 aaKnown RBP13.28□□□□□ -0.28
RNF43-208ENST00000584437 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 TKTL1P51854 596 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 TRAP1Q12931 704 aaKnown RBP13.28□□□□□ -0.28
RNF43-208ENST00000584437 ALFQ53S48 1182 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 BORCS5Q969J3 196 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 TSEN34Q9BSV6 310 aaKnown RBP13.28□□□□□ -0.28
RNF43-208ENST00000584437 SLITRK2Q9H156 845 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 SH3BP4Q9P0V3 963 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 TSPAN16Q9UKR8 245 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 GTF2A1LQ9UNN4 478 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
RNF43-208ENST00000584437 TPP1O14773 563 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 CNPP09543 421 aaKnown RBP13.27□□□□□ -0.28
RNF43-208ENST00000584437 ZNF7P17097 686 aaPredicted RBP13.27□□□□□ -0.28
RNF43-208ENST00000584437 CDH3P22223 829 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.28
RNF43-208ENST00000584437 ANKRD49Q8WVL7 239 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 TPD52L3Q96J77 140 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 APBA2Q99767 749 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 PHACTR1Q9C0D0 580 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 CLK4Q9HAZ1 481 aaKnown RBP13.27□□□□□ -0.28
RNF43-208ENST00000584437 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.28
RNF43-208ENST00000584437 ETNK2Q9NVF9 386 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 STON1Q9Y6Q2 735 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 H7C4K7 107 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 KCNH1O95259 989 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 RHOCP08134 193 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 CPT1AP50416 773 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 RHOAP61586 193 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 BNC1Q01954 994 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 DGCR6Q14129 220 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 KCNT2Q6UVM3 1135 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 MIB1Q86YT6 1006 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 POC5Q8NA72 575 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 TBL1YQ9BQ87 522 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 ATP6V1HQ9UI12 483 aa13.27□□□□□ -0.28
RNF43-208ENST00000584437 A0A087X0B3 334 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 TPH1P17752 444 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 GRIA3P42263 894 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 MMP13P45452 471 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 SNAPC2Q13487 334 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 MICALL2Q8IY33 904 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 MYDGFQ969H8 173 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 TMCO1Q9UM00 188 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.29
RNF43-208ENST00000584437 ZMYM2Q9UBW7 1377 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 CYP1A2P05177 515 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 S100A9P06702 114 aaKnown RBP13.27□□□□□ -0.29
RNF43-208ENST00000584437 FGFR3P22607 806 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 MIPP30301 263 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 FOLH1Q04609 750 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 SLC5A9Q2M3M2 681 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 MACC1Q6ZN28 852 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.29
RNF43-208ENST00000584437 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 MAPRE3Q9UPY8 281 aa13.27□□□□□ -0.29
RNF43-208ENST00000584437 KDELR1P24390 212 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 CDC42P60953 191 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 BST1Q10588 318 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 B3GAT3O94766 335 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 MYBL2P10244 700 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 GUCA1AP43080 201 aaPredicted RBP13.26□□□□□ -0.29
RNF43-208ENST00000584437 YWHAZP63104 245 aaKnown RBP13.26□□□□□ -0.29
RNF43-208ENST00000584437 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 REPS1Q96D71 796 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 TCF12Q99081 682 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 UNKQ9C0B0 810 aaKnown RBP13.26□□□□□ -0.29
RNF43-208ENST00000584437 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 SETD1BQ9UPS6 1966 aaKnown RBP13.26□□□□□ -0.29
RNF43-208ENST00000584437 CCDC182A6NF36 153 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 VCLP18206 1134 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 DSG3P32926 999 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 PRKCQQ04759 706 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 ZSWIM7Q19AV6 140 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 FBXO47Q5MNV8 452 aa13.26□□□□□ -0.29
RNF43-208ENST00000584437 ATAD3BQ5T9A4 648 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms