RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MYO6Q9UM54 1294 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 A0A1B0GTH6 734 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 TTC34A8MYJ7 566 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 SIN3BO75182 1162 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 KRT3P12035 628 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 TNFAIP3P21580 790 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 HOXD12P35452 270 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 STK19P49842 368 aaPredicted RBP21.02■□□□□ 0.96
SS18-224ENST00000584083 PLK1P53350 603 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 CDH4P55283 916 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 SULT2A1Q06520 285 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 C15orf59Q2T9L4 293 aaPredicted RBP21.02■□□□□ 0.96
SS18-224ENST00000584083 C5orf22Q49AR2 442 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 ACBD5Q5T8D3 534 aaPredicted RBP21.02■□□□□ 0.96
SS18-224ENST00000584083 ZNF776Q68DI1 518 aaPredicted RBP21.02■□□□□ 0.96
SS18-224ENST00000584083 IRF2BP2Q7Z5L9 587 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 BAP1Q92560 729 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 C1orf74Q96LT6 269 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 HAPLN3Q96S86 360 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 FEM1AQ9BSK4 669 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 EVLQ9UI08 416 aaPredicted RBP21.02■□□□□ 0.96
SS18-224ENST00000584083 DOCK4Q8N1I0 1966 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 NUMA1Q14980 2115 aa21.02■□□□□ 0.96
SS18-224ENST00000584083 ADAMTS9Q9P2N4 1935 aa21.02■□□□□ 0.95
SS18-224ENST00000584083 LAMA1P25391 3075 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 EDDM13A0A1B0GTR0 161 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 A0A1W2PQC6 194 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 C2CD4BA6NLJ0 364 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 LRRC53A6NM62 1247 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 MEI4A8MW99 385 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 RNASEH1O60930 286 aaKnown RBP21.01■□□□□ 0.95
SS18-224ENST00000584083 SRGAP2O75044 1071 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 CNTN5O94779 1100 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 ENDOD1O94919 500 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 IGLV3-19P01714 112 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 FOXK2Q01167 660 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 ZBTB16Q05516 673 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 ASIC2Q16515 512 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 DUOXA1Q1HG43 343 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 CCDC14Q49A88 953 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 TTC31Q49AM3 519 aaPredicted RBP21.01■□□□□ 0.95
SS18-224ENST00000584083 ALFQ53S48 1182 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 LRSAM1Q6UWE0 723 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 BNIPLQ7Z465 357 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 OR52K2Q8NGK3 314 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 CEP76Q8TAP6 659 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 GANCQ8TET4 914 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 MUC3BQ9H195 1237 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 RSPH9Q9H1X1 276 aaPredicted RBP21.01■□□□□ 0.95
SS18-224ENST00000584083 VPS28Q9UK41 221 aa21.01■□□□□ 0.95
SS18-224ENST00000584083 NYNRINQ9P2P1 1898 aaKnown RBP21.01■□□□□ 0.95
SS18-224ENST00000584083 TARSL2A2RTX5 802 aaKnown RBP21■□□□□ 0.95
SS18-224ENST00000584083 E9PAM4 449 aa21■□□□□ 0.95
SS18-224ENST00000584083 GOLGA6L19H0YKK7 550 aa21■□□□□ 0.95
SS18-224ENST00000584083 RHOCP08134 193 aa21■□□□□ 0.95
SS18-224ENST00000584083 RFC1P35251 1148 aaPredicted RBP21■□□□□ 0.95
SS18-224ENST00000584083 C1QBPQ07021 282 aaKnown RBP21■□□□□ 0.95
SS18-224ENST00000584083 ARID5BQ14865 1188 aa21■□□□□ 0.95
SS18-224ENST00000584083 NR1I3Q14994 352 aa21■□□□□ 0.95
SS18-224ENST00000584083 ARL13BQ3SXY8 428 aa21■□□□□ 0.95
SS18-224ENST00000584083 WDR45BQ5MNZ6 344 aa21■□□□□ 0.95
SS18-224ENST00000584083 C9orf64Q5T6V5 341 aa21■□□□□ 0.95
SS18-224ENST00000584083 SH3PXD2AQ5TCZ1 1133 aa21■□□□□ 0.95
SS18-224ENST00000584083 PEAR1Q5VY43 1037 aaPredicted RBP21■□□□□ 0.95
SS18-224ENST00000584083 ACAD10Q6JQN1 1059 aa21■□□□□ 0.95
SS18-224ENST00000584083 DNAJC24Q6P3W2 148 aa21■□□□□ 0.95
SS18-224ENST00000584083 SLC23A3Q6PIS1 610 aa21■□□□□ 0.95
SS18-224ENST00000584083 MON1BQ7L1V2 547 aa21■□□□□ 0.95
SS18-224ENST00000584083 RABEPKQ7Z6M1 372 aa21■□□□□ 0.95
SS18-224ENST00000584083 ZNF683Q8IZ20 524 aa21■□□□□ 0.95
SS18-224ENST00000584083 C3orf20Q8ND61 904 aa21■□□□□ 0.95
SS18-224ENST00000584083 CADM4Q8NFZ8 388 aa21■□□□□ 0.95
SS18-224ENST00000584083 ALG14Q96F25 216 aa21■□□□□ 0.95
SS18-224ENST00000584083 TMEM9BQ9NQ34 198 aa21■□□□□ 0.95
SS18-224ENST00000584083 MPP6Q9NZW5 540 aa21■□□□□ 0.95
SS18-224ENST00000584083 SLC25A13Q9UJS0 675 aa21■□□□□ 0.95
SS18-224ENST00000584083 TBC1D30Q9Y2I9 924 aa21■□□□□ 0.95
SS18-224ENST00000584083 ITIH6Q6UXX5 1313 aa21■□□□□ 0.95
SS18-224ENST00000584083 ANKRD62A6NC57 917 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 DRGXA6NNA5 263 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 C4orf47A7E2U8 309 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 GPD1P21695 349 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 KCNA4P22459 653 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 MAOBP27338 520 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 PTPN9P43378 593 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 GSCP56915 257 aaPredicted RBP20.99■□□□□ 0.95
SS18-224ENST00000584083 FANCCQ00597 558 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 SKOR2Q2VWA4 1001 aaPredicted RBP20.99■□□□□ 0.95
SS18-224ENST00000584083 ZSCAN23Q3MJ62 389 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 ACCSLQ4AC99 568 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 RAB6CQ53S08 254 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 SFMBT2Q5VUG0 894 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 STRADAQ7RTN6 431 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 TFAP2DQ7Z6R9 452 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 RAB6CQ9H0N0 254 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 SLC6A14Q9UN76 642 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 NCKAP1Q9Y2A7 1128 aa20.99■□□□□ 0.95
SS18-224ENST00000584083 SIGLEC16A6NMB1 481 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 TMCO5BA8MYB1 307 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 C7P10643 843 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms