RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 NCAPHQ15003 741 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 CDKN3Q16667 212 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 POM121L1PQ3SYA9 428 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 PIK3R6Q5UE93 754 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ATCAYQ86WG3 371 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 STK40Q8N2I9 435 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 FBXO39Q8N4B4 442 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ZNF564Q8TBZ8 553 aaPredicted RBP11.51□□□□□ -0.57
CASC3-208ENST00000583649 OR8D1Q8WZ84 308 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 RNF34Q969K3 372 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ARRDC3Q96B67 414 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 HEXIM2Q96MH2 286 aaKnown RBP11.51□□□□□ -0.57
CASC3-208ENST00000583649 IL12RB2Q99665 862 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 SDCBP2Q9H190 292 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 TNMDQ9H2S6 317 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 MTG2Q9H4K7 406 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 LRRC4Q9HBW1 653 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ABCC13Q9NSE7 274 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 IPO11Q9UI26 975 aaKnown RBP11.51□□□□□ -0.57
CASC3-208ENST00000583649 SALL4Q9UJQ4 1053 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ANAPC2Q9UJX6 822 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
CASC3-208ENST00000583649 CSNK1G3Q9Y6M4 447 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 USP9XQ93008 2570 aaPredicted RBP11.51□□□□□ -0.57
CASC3-208ENST00000583649 DOPEY2Q9Y3R5 2298 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 EME2A4GXA9 379 aaPredicted RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 TTC34A8MYJ7 566 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 C10orf142B7Z368 130 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 PLD2O14939 933 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 C4BPAP04003 597 aaKnown RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 JMJD7P0C870 316 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 HNRNPA2B1P22626 353 aaKnown RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 SLC5A2P31639 672 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 TKTL1P51854 596 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 NUCB2P80303 420 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 C12orf56Q8IXR9 622 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 CARNMT1Q8N4J0 409 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 LIN37Q96GY3 246 aaPredicted RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 MYO19Q96H55 970 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 PRR11Q96HE9 360 aaPredicted RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 PSMG3-AS1Q96PY0 264 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 FAM129BQ96TA1 746 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 FGFBP2Q9BYJ0 223 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 SYNDIG1Q9H7V2 258 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 DYRK4Q9NR20 520 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 KCNK4Q9NYG8 393 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 ACSL6Q9UKU0 697 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 SRPRBQ9Y5M8 271 aaKnown RBP11.5□□□□□ -0.57
CASC3-208ENST00000583649 ITIH6Q6UXX5 1313 aa11.5□□□□□ -0.57
CASC3-208ENST00000583649 AHCTF1Q8WYP5 2266 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 A6NNZ2 444 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 TPP1O14773 563 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 SLC31A1O15431 190 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 RTN2O75298 545 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
CASC3-208ENST00000583649 CASRP41180 1078 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 ASPAP45381 313 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 CCR10P46092 362 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 OXCT1P55809 520 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 CLDN10P78369 228 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 FOXK1P85037 733 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 SLC12A1Q13621 1099 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 TBR1Q16650 682 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 PITRM1Q5JRX3 1037 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 FAM26FQ5R3K3 315 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 ESRP1Q6NXG1 681 aaKnown RBP11.49□□□□□ -0.57
CASC3-208ENST00000583649 BORAQ6PGQ7 559 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 ZC3H3Q8IXZ2 948 aaKnown RBP11.49□□□□□ -0.57
CASC3-208ENST00000583649 SIX6OS1Q8N1H7 587 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 TMEM145Q8NBT3 493 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 PARD3BQ8TEW8 1205 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 BTN2A2Q8WVV5 523 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 TMEM159Q96B96 161 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 SFMBT1Q9UHJ3 866 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 TUBD1Q9UJT1 453 aa11.49□□□□□ -0.57
CASC3-208ENST00000583649 BLACEA4D250 179 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 LRRIQ3A6PVS8 624 aaPredicted RBP11.48□□□□□ -0.57
CASC3-208ENST00000583649 IKBKBO14920 756 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 ALOX15BO15296 676 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 NVLO15381 856 aaKnown RBP11.48□□□□□ -0.57
CASC3-208ENST00000583649 TGFB1I1O43294 461 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 ACSL4O60488 711 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 CD58P19256 250 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 CD82P27701 267 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 DRD3P35462 400 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 CASP4P49662 377 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 ZACNQ401N2 412 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 RAB41Q5JT25 222 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 PPP1R26Q5T8A7 1209 aaPredicted RBP11.48□□□□□ -0.57
CASC3-208ENST00000583649 TMEM164Q5U3C3 297 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 BSPRYQ5W0U4 402 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 PM20D1Q6GTS8 502 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms