RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 CCDC127Q96BQ5 260 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 ANKRD36BP1Q96IX9 119 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 MRGPRX1Q96LB2 322 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 MMS19Q96T76 1030 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 GABRG3Q99928 467 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 MKRN2Q9H000 416 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 SPHK2Q9NRA0 654 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 PLK2Q9NYY3 685 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 BCCIPQ9P287 314 aaKnown RBP eCLIP8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 BTBD3Q9Y2F9 522 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 MGAQ8IWI9 3026 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 ATMQ13315 3056 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 ASH1LQ9NR48 2969 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 TMEM8BA6NDV4 472 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 ZNF233A6NK53 670 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 LRRIQ3A6PVS8 624 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 NEDD8-MDP1E9PL57 170 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 CYP26A1O43174 497 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 LRIG2O94898 1065 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 FTH1P19P0C7X4 201 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 IMPDH2P12268 514 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 PFKLP17858 780 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 SYT1P21579 422 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 YWHAQP27348 245 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 STAT6P42226 847 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 TNFRSF4P43489 277 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 CLDN6P56747 220 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 GRIK2Q13002 908 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 ACAP1Q15027 740 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 GEN1Q17RS7 908 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 COL28A1Q2UY09 1125 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 WDR72Q3MJ13 1102 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 KCNT1Q5JUK3 1230 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 EOGTQ5NDL2 527 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 SHC4Q6S5L8 630 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 TPGS1Q6ZTW0 290 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 SCD5Q86SK9 330 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 ACOT1Q86TX2 421 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 CACUL1Q86Y37 369 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 ZC3H3Q8IXZ2 948 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 SYCP3Q8IZU3 236 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 NUP93Q8N1F7 819 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 BAHD1Q8TBE0 780 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 SORCS1Q8WY21 1168 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 FBXO32Q969P5 355 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 ZNF419Q96HQ0 510 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 NUSAP1Q9BXS6 441 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 ELOVL4Q9GZR5 314 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 BLZF1Q9H2G9 400 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 EXOC7Q9UPT5 735 aa8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 COL5A1P20908 1838 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-225ENST00000583438 TBC1D3BA6NDS4 549 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 CYSRT1A8MQ03 144 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 A8MXQ7 604 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 KLRC4O43908 158 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 TLR5O60602 858 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 BMP15O95972 392 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 IGHA1P01876 353 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 TNNC2P02585 160 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 C4BPAP04003 597 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 TYRP14679 529 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 ANXA13P27216 316 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 NTSR1P30989 418 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 IL12RB1P42701 662 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 GIPRP48546 466 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 COPAP53621 1224 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 GAD2Q05329 585 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 LMAN2Q12907 356 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 MYO1EQ12965 1108 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 SLC39A14Q15043 492 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 DUOXA1Q1HG43 343 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 ANO4Q32M45 955 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 FUT11Q495W5 492 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 HSF5Q4G112 596 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 CCNI2Q6ZMN8 369 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 HTR3DQ70Z44 454 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 BHLHA9Q7RTU4 235 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 C11orf74Q86VG3 221 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 LSRQ86X29 649 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 NAXDQ8IW45 347 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 KIAA1958Q8N8K9 716 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 KIAA0895Q8NCT3 520 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 CPLX3Q8WVH0 158 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 JAKMIP2Q96AA8 810 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 CEP295NLQ96MC4 621 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 CAAP1Q9H8G2 361 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 APOBEC3GQ9HC16 384 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 CSNK1G1Q9HCP0 422 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 FAM49BQ9NUQ9 324 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 MORC2Q9Y6X9 1032 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-225ENST00000583438 TDRD6O60522 2096 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 SLC9A3R1O14745 358 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 EIF3DO15371 548 aaKnown RBP eCLIP8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 DYRK3O43781 588 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 LEFTY1O75610 366 aa8.28□□□□□ -1.08
PPP4R1-225ENST00000583438 STC2O76061 302 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms