RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 CLEC17AQ6ZS10 378 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 KCNE4Q8WWG9 221 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 AZIN2Q96A70 460 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 PAGE5Q96GU1 130 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 HIC2Q96JB3 615 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 CNGB3Q9NQW8 809 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 USP12O75317 370 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 IGLV3-27P01718 113 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 PFKFB1P16118 471 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
TOP3A-215ENST00000583328 MZF1P28698 734 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-215ENST00000583328 NUDT1P36639 197 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 NNMTP40261 264 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 DAOAP59103 153 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 ERVPABLB-1P60509 514 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 ENPEPQ07075 957 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 VAC14Q08AM6 782 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 ADAM9Q13443 819 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 FSCBQ5H9T9 825 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 NADSYN1Q6IA69 706 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 MSANTD2Q6P1R3 559 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 CFAP52Q8N1V2 620 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 SLC25A45Q8N413 288 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 KCTD13Q8WZ19 329 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 PTPRN2Q92932 1015 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 MYEOVQ96EZ4 313 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 RPL10LQ96L21 214 aaKnown RBP12.72□□□□□ -0.37
TOP3A-215ENST00000583328 PRICKLE1Q96MT3 831 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-215ENST00000583328 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 DEPDC7Q96QD5 511 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 CYTH4Q9UIA0 394 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 DMTF1Q9Y222 760 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 COL6A6A6NMZ7 2263 aa12.72□□□□□ -0.37
TOP3A-215ENST00000583328 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 A0A1B0GVL5 298 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 SLC28A2O43868 658 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 OPA1O60313 960 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 RTN2O75298 545 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 WISP1O95388 367 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 SETSIPP0DME0 302 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 DGKAP23743 735 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 DRD3P35462 400 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 LSSP48449 732 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 RGS7P49802 495 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 MXI1P50539 228 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 ELAVL3Q14576 367 aaKnown RBP12.71□□□□□ -0.37
TOP3A-215ENST00000583328 NFIL3Q16649 462 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 DCAF6Q58WW2 860 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 MS4A13Q5J8X5 152 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 CDCP2Q5VXM1 449 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 APCDD1Q8J025 514 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 SCML4Q8N228 414 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 TTC9Q92623 222 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 DPH1Q9BZG8 443 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 ABCG4Q9H172 646 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 NUCKS1Q9H1E3 243 aaKnown RBP12.71□□□□□ -0.37
TOP3A-215ENST00000583328 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 POLR1BQ9H9Y6 1135 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 USP25Q9UHP3 1055 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 ARID1BQ8NFD5 2236 aaPredicted RBP12.71□□□□□ -0.37
TOP3A-215ENST00000583328 NAV2Q8IVL1 2488 aa12.71□□□□□ -0.37
TOP3A-215ENST00000583328 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 PLXNA2O75051 1894 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 PRAMEF26H0Y7S4 382 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 PIK3R2O00459 728 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 FFAR2O15552 330 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 SLC7A4O43246 635 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 ACTN4O43707 911 aaKnown RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 CSO75390 466 aaKnown RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 DXOO77932 396 aaKnown RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 LUC7L3O95232 432 aaKnown RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 LTFP02788 710 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 VDRP11473 427 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 SYKP43405 635 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 STK19P49842 368 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 SETMARQ53H47 684 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 FAM46CQ5VWP2 391 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 OR4C6Q8NH72 309 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
TOP3A-215ENST00000583328 MED8Q96G25 268 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 VCPIP1Q96JH7 1222 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 THSD1Q9NS62 852 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 UCKL1Q9NWZ5 548 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 MAPK8IP1Q9UQF2 711 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 CA5BQ9Y2D0 317 aa12.7□□□□□ -0.38
TOP3A-215ENST00000583328 MYLKQ15746 1914 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 A0A1B0GVM2 712 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 O00370 1275 aa12.69□□□□□ -0.38
TOP3A-215ENST00000583328 SLC31A1O15431 190 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms