RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 SETMARQ53H47 684 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 FAM133BQ5BKY9 247 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 PITRM1Q5JRX3 1037 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 USP53Q70EK8 1073 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 CLEC14AQ86T13 490 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 TRIM69Q86WT6 500 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 ARL14Q8N4G2 192 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 CARNMT1Q8N4J0 409 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 ARRDC3Q96B67 414 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 GRAMD1AQ96CP6 724 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 RPL10LQ96L21 214 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 IMPG2Q9BZV3 1241 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 EVA1BQ9NVM1 165 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 ATXN7L1Q9ULK2 861 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 CEP83Q9Y592 693 aa13.01□□□□□ -0.33
CSNK1D-218ENST00000581655 K7ESM1 405 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 TULP2O00295 520 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 IRAK2O43187 625 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 ACSL4O60488 711 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 NEBLO76041 1014 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 VAV1P15498 845 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC11A2P49281 568 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 RPS24P62847 133 aaKnown RBP13□□□□□ -0.33
CSNK1D-218ENST00000581655 ECT2LQ008S8 904 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 CDH18Q13634 790 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 ELAVL3Q14576 367 aaKnown RBP13□□□□□ -0.33
CSNK1D-218ENST00000581655 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
CSNK1D-218ENST00000581655 BSPRYQ5W0U4 402 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 TMEM145Q8NBT3 493 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 HJURPQ8NCD3 748 aaPredicted RBP13□□□□□ -0.33
CSNK1D-218ENST00000581655 SGF29Q96ES7 293 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 MYEOVQ96EZ4 313 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 CALN1Q9BXU9 219 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
CSNK1D-218ENST00000581655 DNAI2Q9GZS0 605 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 SEPT3Q9UH03 358 aa13□□□□□ -0.33
CSNK1D-218ENST00000581655 UTP20O75691 2785 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 TYW5A2RUC4 315 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 CPED1A4D0V7 1026 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 NEMP2A6NFY4 417 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 YJEFN3A6XGL0 299 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 E7ENQ6 273 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 SCAMP1O15126 338 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC31A1O15431 190 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC7A4O43246 635 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 GJB6O95452 261 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 ITGB2P05107 769 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 PRLRP16471 622 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 CR2P20023 1033 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 CASP1P29466 404 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 NUMBP49757 651 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 STK19P49842 368 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 AMPD3Q01432 767 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 SRSF6Q13247 344 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 ZNF177Q13360 481 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 E2F4Q16254 413 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 CDKN3Q16667 212 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 ZNF542PQ5EBM4 170 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 C1orf220Q5T0J3 134 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 AGBL4Q5VU57 503 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 GUSBP11Q6P575 273 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 CRTC1Q6UUV9 634 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 RBM44Q6ZP01 1051 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 UNC13DQ70J99 1090 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 EFL1Q7Z2Z2 1120 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 OR13H1Q8NG92 308 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 WDR36Q8NI36 951 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 KLK6Q92876 244 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 DUSP23Q9BVJ7 150 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 BACH2Q9BYV9 841 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 LRRC4Q9HBW1 653 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 SARDHQ9UL12 918 aa12.99□□□□□ -0.33
CSNK1D-218ENST00000581655 NBPF19A0A087WUL8 3843 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 RNGTTO60942 597 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 MOCS3O95396 460 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 ITGA2BP08514 1039 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 SFTPCP11686 197 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC8A3P57103 927 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 ADIGQ0VDE8 80 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 TGIF1Q15583 401 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 NUGGCQ68CJ6 796 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 ARHGAP17Q68EM7 881 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 CNNM4Q6P4Q7 775 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 CCDC117Q8IWD4 279 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms