RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 XPO7Q9UIA9 1087 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 MAST4O15021 2626 aa10.96□□□□□ -0.66
RFFL-209ENST00000581265 KCNU1A8MYU2 1149 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 MED7O43513 233 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 RNASEH2AO75792 299 aaKnown RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 TRUB2O95900 331 aaKnown RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 ADH1BP00325 375 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 APOEP02649 317 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 AFPP02771 609 aaKnown RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 WNT1P04628 370 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 TACR2P21452 398 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 C5AR1P21730 350 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 CD38P28907 300 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 NNMTP40261 264 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 PLK1P53350 603 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 NUCB2P80303 420 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 SULT2A1Q06520 285 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 MORC3Q14149 939 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 INAVAQ3KP66 663 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 KLHL10Q6JEL2 608 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 TAC4Q86UU9 113 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 APCDD1Q8J025 514 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 LGI2Q8N0V4 545 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 ZNF843Q8N446 348 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 AADATQ8N5Z0 425 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 PDCD7Q8N8D1 485 aaKnown RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 RPL10LQ96L21 214 aaKnown RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 SLC6A18Q96N87 628 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 UBE2TQ9NPD8 197 aaPredicted RBP10.95□□□□□ -0.66
RFFL-209ENST00000581265 TJP2Q9UDY2 1190 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 SLC12A6Q9UHW9 1150 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 CYTH4Q9UIA0 394 aa10.95□□□□□ -0.66
RFFL-209ENST00000581265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
RFFL-209ENST00000581265 LAMA5O15230 3695 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 A0A1W2PR77 199 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 E5RJQ4 531 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 E9PAM4 449 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 WNT9AO14904 365 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 LATO43561 262 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 LETM1O95202 739 aaPredicted RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 MOCS2O96007 188 aaPredicted RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 C1SP09871 688 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 SLC2A3P11169 496 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 CDK4P11802 303 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 KRT5P13647 590 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 OXCT1P55809 520 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 CFHR1Q03591 330 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 ELAVL3Q14576 367 aaKnown RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 SHBQ15464 509 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 PRAMEF14Q5SWL7 426 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 RNF219Q5W0B1 726 aaPredicted RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 RAP1GAP2Q684P5 730 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.66
RFFL-209ENST00000581265 ENOSF1Q7L5Y1 443 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 TMPRSS12Q86WS5 348 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 CHSY1Q86X52 802 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 MARCH9Q86YJ5 346 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 CCAR2Q8N163 923 aaKnown RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 STK40Q8N2I9 435 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 ATP6V0D2Q8N8Y2 350 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 SAP25Q8TEE9 199 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 FRS2Q8WU20 508 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 FAM131CQ96AQ9 280 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 PPP1R9BQ96SB3 815 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 PRMT1Q99873 361 aaKnown RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
RFFL-209ENST00000581265 KDM4CQ9H3R0 1056 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 CLMPQ9H6B4 373 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 FTSJ1Q9UET6 329 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 CEP83Q9Y592 693 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 PCDHGA1Q9Y5H4 931 aa10.94□□□□□ -0.66
RFFL-209ENST00000581265 TMEM131Q92545 1883 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 FAM149AA5PLN7 773 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 F5H5T6 163 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 TLR4O00206 839 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 YKT6O15498 198 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 IL1BP01584 269 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 GLI1P08151 1106 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 MZF1P28698 734 aaPredicted RBP10.93□□□□□ -0.66
RFFL-209ENST00000581265 RXRGP48443 463 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 PSMD8P48556 350 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 STK19P49842 368 aaPredicted RBP10.93□□□□□ -0.66
RFFL-209ENST00000581265 ADPRHP54922 357 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
RFFL-209ENST00000581265 CDK17Q00537 523 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 IL9RQ01113 521 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 MTA1Q13330 715 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 PDCLQ13371 301 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 TAF5Q15542 800 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 CCDC157Q569K6 752 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 TTC39BQ5VTQ0 682 aaPredicted RBP10.93□□□□□ -0.66
RFFL-209ENST00000581265 DHRS13Q6UX07 377 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 GATAD2AQ86YP4 633 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 WDTC1Q8N5D0 677 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 MFSD2AQ8NA29 543 aa10.93□□□□□ -0.66
RFFL-209ENST00000581265 OR14C36Q8NHC7 312 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms