RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 C1orf74Q96LT6 269 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SPATA13Q96N96 652 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 AGAP3Q96P47 875 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FMO2Q99518 471 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 APOL2Q9BQE5 337 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MLPHQ9BV36 600 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FRMD8P1Q9BZ68 369 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PRKD2Q9BZL6 878 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZYG11BQ9C0D3 744 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PRO3102Q9H379 93 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SEMA4AQ9H3S1 761 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SLC28A3Q9HAS3 691 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RAB6BQ9NRW1 208 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARGLU1Q9NWB6 273 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TMEM248Q9NWD8 314 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PLK2Q9NYY3 685 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 UBP1Q9NZI7 540 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 WHRNQ9P202 907 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 STK39Q9UEW8 545 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ATP8A1Q9Y2Q0 1164 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FARP1Q9Y4F1 1045 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NLRC5Q86WI3 1866 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 C5orf60A6NFR6 353 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HACD1B0YJ81 288 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 AGPSO00116 658 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MAP2K7O14733 419 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPP1R12AO14974 1030 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MUSKO15146 869 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TRIM24O15164 1050 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FGF10O15520 208 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SNAP91O60641 907 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TBL1XO60907 577 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 XYLBO75191 536 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 USP12O75317 370 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPFIA2O75334 1257 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GCATO75600 419 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PIAS1O75925 651 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HLA-DQB2P05538 268 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 F7P08709 466 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HNRNPA1P09651 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PTPN2P17706 415 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NFKB1P19838 968 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HOXD9P28356 352 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MZF1P28698 734 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HSD17B3P37058 310 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ETFBP38117 255 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 VIPR2P41587 438 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NR2C2P49116 596 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SLC11A2P49281 568 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 DRG2P55039 364 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SLC7A9P82251 487 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 COG7P83436 770 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPARDQ03181 441 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 DLX2Q07687 328 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPIDQ08752 370 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NIPAL4Q0D2K0 466 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 XRCC4Q13426 336 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 BBS9Q3SYG4 887 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NAIF1Q69YI7 327 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ASTLQ6HA08 431 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CXorf57Q6NSI4 855 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 EMBQ6PCB8 327 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SYCE2Q6PIF2 218 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LRRC31Q6UY01 552 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARHGEF18Q6ZSZ5 1173 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TPGS1Q6ZTW0 290 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZNF534Q76KX8 674 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TADA2BQ86TJ2 420 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RNF135Q8IUD6 432 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ANKMY2Q8IV38 441 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CMTM8Q8IZV2 173 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MPP5Q8N3R9 675 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZNF276Q8N554 614 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SPATA22Q8NHS9 363 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 UBLCP1Q8WVY7 318 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MRPL38Q96DV4 380 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ASIC4Q96FT7 647 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 OXNAD1Q96HP4 312 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 C9orf72Q96LT7 481 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NSMCE3Q96MG7 304 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FAM161BQ96MY7 647 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GCNAQ96QF7 691 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SPON2Q9BUD6 331 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LINC00597Q9H2U6 94 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TTYH1Q9H313 450 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CDC42EP4Q9H3Q1 356 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TASP1Q9H6P5 420 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CATSPERBQ9H7T0 1116 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PIDD1Q9HB75 910 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PLAC1Q9HBJ0 212 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SAYSD1Q9NPB0 183 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NINJ2Q9NZG7 142 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PAK5Q9P286 719 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KLHL8Q9P2G9 620 aaPredicted RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPARGC1AQ9UBK2 798 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms