RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 EPHB2P29323 1055 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 HLA-FP30511 346 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 HOXC13P31276 330 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 TNFRSF4P43489 277 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 RPS9P46781 194 aaKnown RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 IRAK1P51617 712 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 TPI1P60174 286 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 COPS2P61201 443 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 TUBB4BP68371 445 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 CKAP4Q07065 602 aaKnown RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 EIF4HQ15056 248 aaKnown RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 ALFQ53S48 1182 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 PPP6R3Q5H9R7 873 aaPredicted RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 KCNT1Q5JUK3 1230 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 C6orf118Q5T5N4 469 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 FAM72AQ5TYM5 149 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 FAM72DQ6L9T8 149 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 SETD3Q86TU7 594 aaPredicted RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 FAM72BQ86X60 149 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 AHI1Q8N157 1196 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 PYROXD2Q8N2H3 581 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 EXD1Q8NHP7 514 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 HSPH1Q92598 858 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 RBM41Q96IZ5 413 aaKnown RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 NAP1L3Q99457 506 aaPredicted RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 GOLPH3Q9H4A6 298 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 CATSPERBQ9H7T0 1116 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 ABCB8Q9NUT2 735 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 MPP6Q9NZW5 540 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 KIAA1522Q9P206 1035 aaPredicted RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 GGA2Q9UJY4 613 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 NEU3Q9UQ49 428 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 MTF2Q9Y483 593 aaPredicted RBP15.95■□□□□ 0.14
SS18-216ENST00000580751 MRFAP1Q9Y605 127 aa15.95■□□□□ 0.14
SS18-216ENST00000580751 ZNF487B1APH4 448 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 EEF2KO00418 725 aaKnown RBP15.94■□□□□ 0.14
SS18-216ENST00000580751 KCNK3O14649 394 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 TRIM24O15164 1050 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 CNTN5O94779 1100 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 GJC1P36383 396 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 ARL4AP40617 200 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 MAPKAPK2P49137 400 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 TAS2R40P59535 323 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 MESP2Q0VG99 397 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 E2F5Q15329 346 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 CA9Q16790 459 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 TMEM31Q5JXX7 168 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 TXNRD3NBQ6F5E7 133 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 TFAP2DQ7Z6R9 452 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 RCOR2Q8IZ40 523 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 RASGEF1CQ8N431 466 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 WFDC5Q8TCV5 224 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 ACTRT1Q8TDG2 376 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 KCNV2Q8TDN2 545 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 CLDN23Q96B33 292 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 KCTD15Q96SI1 283 aaPredicted RBP15.94■□□□□ 0.14
SS18-216ENST00000580751 IER2Q9BTL4 223 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 LMAN1LQ9HAT1 526 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 PRDM16Q9HAZ2 1276 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 C11orf16Q9NQ32 467 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 DONSONQ9NYP3 566 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 EFR3BQ9Y2G0 817 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 TBC1D30Q9Y2I9 924 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 DOCK4Q8N1I0 1966 aa15.94■□□□□ 0.14
SS18-216ENST00000580751 FAM86C2PA6NEL3 165 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 H3BRJ5 948 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 K7EQS6 105 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 TIMM44O43615 452 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 ZRANB2O95218 330 aaKnown RBP eCLIP15.93■□□□□ 0.14
SS18-216ENST00000580751 RHOCP08134 193 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 OR1E1P30953 314 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 CD70P32970 193 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 PTPN7P35236 360 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 PAFAH1B1P43034 410 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 HCAR3P49019 387 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 LMAN2Q12907 356 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 KRT81Q14533 505 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 DMC1Q14565 340 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 GEN1Q17RS7 908 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 FSCBQ5H9T9 825 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 ZFYVE27Q5T4F4 411 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 ARTNQ5T4W7 220 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 CXorf57Q6NSI4 855 aaKnown RBP15.93■□□□□ 0.14
SS18-216ENST00000580751 ZNF783Q6ZMS7 281 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 RFX8Q6ZV50 586 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 KIAA0907Q7Z7F0 614 aaPredicted RBP15.93■□□□□ 0.14
SS18-216ENST00000580751 CPNE8Q86YQ8 564 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 MAP7D3Q8IWC1 876 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 CEP112Q8N8E3 955 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 RTL3Q8N8U3 475 aaKnown RBP15.93■□□□□ 0.14
SS18-216ENST00000580751 MNS1Q8NEH6 495 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 UCMAQ8WVF2 138 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 MAIP1Q8WWC4 291 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 EZH1Q92800 747 aaPredicted RBP15.93■□□□□ 0.14
SS18-216ENST00000580751 MAGEB5Q9BZ81 275 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 CHRDQ9H2X0 955 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 RBM12Q9NTZ6 932 aaKnown RBP15.93■□□□□ 0.14
SS18-216ENST00000580751 TMEM248Q9NWD8 314 aa15.93■□□□□ 0.14
SS18-216ENST00000580751 RCOR3Q9P2K3 495 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms