RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	FBXL12	Q9NXK8	326 aa		6.28	□□□□□ -1.4
KPNB1-209	ENST00000580158	CHORDC1	Q9UHD1	332 aa	Predicted RBP	6.28	□□□□□ -1.4
KPNB1-209	ENST00000580158	ACSL6	Q9UKU0	697 aa		6.28	□□□□□ -1.4
KPNB1-209	ENST00000580158	PHTF1	Q9UMS5	762 aa		6.28	□□□□□ -1.4
KPNB1-209	ENST00000580158	UNC13C	Q8NB66	2214 aa		6.27	□□□□□ -1.4
KPNB1-209	ENST00000580158	CPED1	A4D0V7	1026 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	WIPF3	A6NGB9	483 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158		F8VP50	259 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	TMX2-CTNND1	H3BSU7	103 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	PLD2	O14939	933 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	HNRNPDL	O14979	420 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	RNASEH1	O60930	286 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	CYBB	P04839	570 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	PRKCG	P05129	697 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	OR52Z1	P0C646	297 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	GNLY	P22749	145 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	DGKA	P23743	735 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	SLC6A4	P31645	630 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	CHKA	P35790	457 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	UQCRFS1	P47985	274 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	MLLT10	P55197	1068 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	DPYD	Q12882	1025 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	C11orf91	Q3C1V1	193 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	ADCK5	Q3MIX3	580 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	FNDC3B	Q53EP0	1204 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	TMEM164	Q5U3C3	297 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	HS2ST1	Q7LGA3	356 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	VASH2	Q86V25	355 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	SPATS2	Q86XZ4	545 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	NT5DC4	Q86YG4	428 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	ADGRF2	Q8IZF7	708 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	NUP93	Q8N1F7	819 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	TEX19	Q8NA77	164 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	HTR3C	Q8WXA8	447 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	MYLPF	Q96A32	169 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	MEGF10	Q96KG7	1140 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	CATSPER2	Q96P56	530 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	OMD	Q99983	421 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	SYT15	Q9BQS2	421 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	MSTO1	Q9BUK6	570 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	TIPIN	Q9BVW5	301 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	CCSER2	Q9H7U1	834 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	AKTIP	Q9H8T0	292 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	NCOA5	Q9HCD5	579 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	BRMS1	Q9HCU9	246 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	NLGN3	Q9NZ94	848 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	NCKIPSD	Q9NZQ3	722 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	SUN2	Q9UH99	717 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	CPSF3	Q9UKF6	684 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	CDH9	Q9ULB4	789 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	L1RE1	Q9UN81	338 aa		6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	NYNRIN	Q9P2P1	1898 aa	Known RBP	6.27	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3D	A0A087WVF3	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3I	A0A087WXS9	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3E	A0A087X179	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3K	A0A087X1G2	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	PMS2P1	A4D2B8	440 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3F	A6NER0	549 aa	Predicted RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3L	B9A6J9	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	WNT9A	O14904	365 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	NVL	O15381	856 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	HNRNPR	O43390	633 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	ATP2C2	O75185	946 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	SEMA7A	O75326	666 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	CLDN1	O95832	211 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3H	P0C7X1	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	JMJD7	P0C870	316 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	ATP5C1	P36542	298 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	NUDT1	P36639	197 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	CCT6A	P40227	531 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	PSMC1	P62191	440 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	PLAUR	Q03405	335 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	ZNF177	Q13360	481 aa	Predicted RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	SEPT6	Q14141	434 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	SPIDR	Q14159	915 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	ELOA	Q14241	798 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	CCDC142	Q17RM4	750 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	LACTB2	Q53H82	288 aa	Predicted RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	DCAF6	Q58WW2	860 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	SNX30	Q5VWJ9	437 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3G	Q6DHY5	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3C	Q6IPX1	549 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	RAB11FIP2	Q7L804	512 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	DPH6	Q7L8W6	267 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	EFL1	Q7Z2Z2	1120 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TIPARP	Q7Z3E1	657 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	OSTM1	Q86WC4	334 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TBC1D3	Q8IZP1	549 aa	Predicted RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TOP6BL	Q8N6T0	577 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	TMEM161B	Q8NDZ6	487 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	STK32A	Q8WU08	396 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	CACTIN	Q8WUQ7	758 aa	Known RBP	6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	SORCS1	Q8WY21	1168 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	WBP2	Q969T9	261 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	KLHDC7B	Q96G42	594 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	AIFM3	Q96NN9	605 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	SLC2A11	Q9BYW1	496 aa		6.26	□□□□□ -1.41
KPNB1-209	ENST00000580158	STRADB	Q9C0K7	418 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms