RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 F5H5T6 163 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 FLRT2O43155 660 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 MED7O43513 233 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 BNIP3LO60238 219 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 RNASEH1O60930 286 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 MOCS3O95396 460 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 GNA14O95837 355 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 IL1BP01584 269 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 IGLV3-25P01717 112 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 C7P10643 843 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 PPP1R2P41236 205 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 GRIA4P48058 902 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 CCT8P50990 548 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 MARSP56192 900 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 C21orf59P57076 290 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 PPP2CBP62714 309 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 YWHAZP63104 245 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 PPP2CAP67775 309 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 NME3Q13232 169 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 SHBQ15464 509 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 RNF219Q5W0B1 726 aaPredicted RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 OR6B2Q6IFH4 312 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 FBXL22Q6P050 247 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 TRIM65Q6PJ69 517 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 LRSAM1Q6UWE0 723 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 DHRS13Q6UX07 377 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 FAM183BPQ6ZVS7 135 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 TMPRSS7Q7RTY8 843 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 GLRX5Q86SX6 157 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 IRF2BP1Q8IU81 584 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 CCAR2Q8N163 923 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 ATP6V0D2Q8N8Y2 350 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 C1orf131Q8NDD1 294 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 HNRNPLLQ8WVV9 542 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 PRMT1Q99873 361 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 CCDC86Q9H6F5 360 aaKnown RBP9.22□□□□□ -0.93
GGA3-207ENST00000578896 OSGEPQ9NPF4 335 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 DDIT4Q9NX09 232 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 CA5BQ9Y2D0 317 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 RAXQ9Y2V3 346 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 PCDHGB2Q9Y5G2 931 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 PTPRQQ9UMZ3 2332 aa9.21□□□□□ -0.93
GGA3-207ENST00000578896 TRPM6Q9BX84 2022 aa9.21□□□□□ -0.93
GGA3-207ENST00000578896 TBC1D3DA0A087WVF3 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3IA0A087WXS9 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3EA0A087X179 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3KA0A087X1G2 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 EDDM13A0A1B0GTR0 161 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 A0A1W2PR77 199 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TARSL2A2RTX5 802 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3FA6NER0 549 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 TRABD2BA6NFA1 517 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 LRRC72A6NJI9 287 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3LB9A6J9 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 SART1O43290 800 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 RTN2O75298 545 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 ERBB2P04626 1255 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 SRPRAP08240 638 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3HP0C7X1 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TFE3P19532 575 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 MAT2AP31153 395 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 DRD3P35462 400 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 RNASE9P60153 205 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 RACK1P63244 317 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 CDK17Q00537 523 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 CYP4F3Q08477 520 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 BNIP3Q12983 259 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 DNAJC3Q13217 504 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 NNTQ13423 1086 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 EIF4EBP2Q13542 120 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 COL9A2Q14055 689 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 ACCSLQ4AC99 568 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3GQ6DHY5 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3CQ6IPX1 549 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 CXorf57Q6NSI4 855 aaKnown RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 USP30Q70CQ3 517 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TBC1D3Q8IZP1 549 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 OR2T34Q8NGX1 318 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 PPP1R13BQ96KQ4 1090 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 BTN2A3PQ96KV6 586 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 RPRD1AQ96P16 312 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 SLC2A13Q96QE2 648 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 CDC6Q99741 560 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 ACE2Q9BYF1 805 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
GGA3-207ENST00000578896 SIK2Q9H0K1 926 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 ANLNQ9NQW6 1124 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 TMPRSS4Q9NRS4 437 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.21□□□□□ -0.94
GGA3-207ENST00000578896 SARDHQ9UL12 918 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 VANGL2Q9ULK5 521 aa9.21□□□□□ -0.94
GGA3-207ENST00000578896 A0A1B0GTQ1 180 aa9.2□□□□□ -0.94
GGA3-207ENST00000578896 RNF103O00237 685 aa9.2□□□□□ -0.94
GGA3-207ENST00000578896 FOXN3O00409 490 aaPredicted RBP9.2□□□□□ -0.94
GGA3-207ENST00000578896 VILLO15195 856 aa9.2□□□□□ -0.94
GGA3-207ENST00000578896 TNFSF14O43557 240 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms