RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 EFEMP1Q12805 493 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 CDH17Q12864 832 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TAF10Q12962 218 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 DUSP4Q13115 394 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 PLD1Q13393 1074 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 KBTBD12Q3ZCT8 623 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TMCO4Q5TGY1 634 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 MANEALQ5VSG8 457 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 STEAP4Q687X5 459 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 KLHDC10Q6PID8 442 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 PPM1NQ8N819 430 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 CCDC197Q8NCU1 140 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 DCAKDQ8WVC6 231 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 ATP2A3Q93084 1043 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 FCRL5Q96RD9 977 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 HERC2P3Q9BVR0 1158 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TRPM5Q9NZQ8 1165 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 CTNNAL1Q9UBT7 734 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TBX21Q9UL17 535 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 CDY1Q9Y6F8 540 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 TSC2P49815 1807 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 FAM159BA6NKW6 160 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 NT5C1B-RDH14C9J2C7 533 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 KCNK1O00180 336 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 ZBTB24O43167 697 aaPredicted RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 FAM155BO75949 473 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 TIMP1P01033 207 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 URODP06132 367 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 CCNB1P14635 433 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 RAG1P15918 1043 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 GCAP28676 217 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 OR1D2P34982 312 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 GJA8P48165 433 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 MAPKAPK2P49137 400 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 HARS2P49590 506 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 GATMP50440 423 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 SEC24CP53992 1094 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 SESN2P58004 480 aaPredicted RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 GAD2Q05329 585 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 MGAT5Q09328 741 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 LAMB3Q13751 1172 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 HNRNPDQ14103 355 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 RTP2Q5QGT7 225 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 HECTD3Q5T447 861 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 UBAP2Q5T6F2 1119 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 SNX30Q5VWJ9 437 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 UNC5AQ6ZN44 842 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 YTHDF3Q7Z739 585 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 ITIH5Q86UX2 942 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 CCDC117Q8IWD4 279 aaPredicted RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 CYP4X1Q8N118 509 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 UMODL1-AS1Q8N2C9 162 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 ZNF461Q8TAF7 563 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 MGARPQ8TDB4 240 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 LRRC8CQ8TDW0 803 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 ACMSDQ8TDX5 336 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 AZIN2Q96A70 460 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 MRRFQ96E11 262 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 PAIP2Q9BPZ3 127 aaKnown RBP11.38□□□□□ -0.59
SKA2-204ENST00000578519 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 IL22Q9GZX6 179 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 CWH43Q9H720 699 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 ENTPD7Q9NQZ7 604 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 MFHAS1Q9Y4C4 1052 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 PCDHB12Q9Y5F1 795 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 HS3ST4Q9Y661 456 aa11.38□□□□□ -0.59
SKA2-204ENST00000578519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 DRGXA6NNA5 263 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 F5H5T6 163 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
SKA2-204ENST00000578519 TLR5O60602 858 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 LPXNO60711 386 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 AVILO75366 819 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 BANF1O75531 89 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 ALDH1A2O94788 518 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 ZDHHC11BP0C7U3 371 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 NEFHP12036 1026 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 KRT4P19013 534 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 PAMP19021 973 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 DRD4P21917 467 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 HADHAP40939 763 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 GPR15P49685 360 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 NRLP54845 237 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 DSG1Q02413 1049 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 ITIH4Q14624 930 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 PARP15Q460N3 678 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 RABGAP1LQ5R372 815 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 GRTP1Q5TC63 336 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 SDHAF4Q5VUM1 108 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 CCDC121Q6ZUS5 278 aa11.37□□□□□ -0.59
SKA2-204ENST00000578519 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms