RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 ERVW-1Q9UQF0 538 aa23.77■■□□□ 1.4
LIMD2-204ENST00000578297 OR51B4Q9Y5P0 310 aa23.77■■□□□ 1.4
LIMD2-204ENST00000578297 DOCK4Q8N1I0 1966 aa23.77■■□□□ 1.4
LIMD2-204ENST00000578297 SSU72P8A0A1W2PR75 194 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 DCLK1O15075 740 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 PSMA2P25787 234 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 CTSOP43234 321 aaPredicted RBP23.76■■□□□ 1.39
LIMD2-204ENST00000578297 ADKP55263 362 aaKnown RBP23.76■■□□□ 1.39
LIMD2-204ENST00000578297 MAPK8IP2Q13387 824 aaPredicted RBP23.76■■□□□ 1.39
LIMD2-204ENST00000578297 CCDC122Q5T0U0 273 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 SCYL2Q6P3W7 929 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 KBTBD6Q86V97 674 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 CNGA4Q8IV77 575 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 FAM160A2Q8N612 972 aaPredicted RBP23.76■■□□□ 1.39
LIMD2-204ENST00000578297 RETREG1Q9H6L5 497 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 SUN2Q9UH99 717 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 INVSQ9Y283 1065 aa23.76■■□□□ 1.39
LIMD2-204ENST00000578297 COPAP53621 1224 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 ZNF252P-AS1Q0IIN9 211 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 ASTE1Q2TB18 679 aaPredicted RBP23.75■■□□□ 1.39
LIMD2-204ENST00000578297 MAP7D1Q3KQU3 841 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 PLK5Q496M5 336 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 RNF219Q5W0B1 726 aaPredicted RBP23.75■■□□□ 1.39
LIMD2-204ENST00000578297 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.75■■□□□ 1.39
LIMD2-204ENST00000578297 RLN3Q8WXF3 142 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 SPACA7Q96KW9 195 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 MAGEB5Q9BZ81 275 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 TRIM7Q9C029 511 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 MKRN2Q9H000 416 aaKnown RBP23.75■■□□□ 1.39
LIMD2-204ENST00000578297 THAP2Q9H0W7 228 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 DUSP15Q9H1R2 295 aaPredicted RBP23.75■■□□□ 1.39
LIMD2-204ENST00000578297 PRDM16Q9HAZ2 1276 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 NCDNQ9UBB6 729 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 ZNF212Q9UDV6 495 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 FZD10Q9ULW2 581 aa23.75■■□□□ 1.39
LIMD2-204ENST00000578297 GPR179Q6PRD1 2367 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 RIF1Q5UIP0 2472 aaKnown RBP23.74■■□□□ 1.39
LIMD2-204ENST00000578297 FAM72CH0Y354 149 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 ZNF217O75362 1048 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 RHOCP08134 193 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 OR1E1P30953 314 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 VASPP50552 380 aaPredicted RBP23.74■■□□□ 1.39
LIMD2-204ENST00000578297 SLC18A3Q16572 532 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 EFHC2Q5JST6 749 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 C6orf118Q5T5N4 469 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 FAM72AQ5TYM5 149 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 FAM72DQ6L9T8 149 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 TFAP2DQ7Z6R9 452 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 METTL3Q86U44 580 aaKnown RBP23.74■■□□□ 1.39
LIMD2-204ENST00000578297 FAM72BQ86X60 149 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 TMPRSS6Q8IU80 811 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 ZNF366Q8N895 744 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 LOXL4Q96JB6 756 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 MUC3BQ9H195 1237 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 SLC6A17Q9H1V8 727 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 FBRSQ9HAH7 460 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 PRSS16Q9NQE7 514 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 GMEB2Q9UKD1 530 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 OTOGLQ3ZCN5 2332 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 PLXND1Q9Y4D7 1925 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 SPAG17Q6Q759 2223 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 WDR87Q6ZQQ6 2873 aa23.74■■□□□ 1.39
LIMD2-204ENST00000578297 AKR1B15C9JRZ8 316 aaPredicted RBP23.73■■□□□ 1.39
LIMD2-204ENST00000578297 RNF8O76064 485 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 RHOBTB1O94844 696 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 LRIG2O94898 1065 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 CYP1A2P05177 515 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 RETP07949 1114 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 C7P10643 843 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 L1CAMP32004 1257 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 GFPT1Q06210 699 aaPredicted RBP23.73■■□□□ 1.39
LIMD2-204ENST00000578297 ELF2Q15723 593 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 HNRNPA1L2Q32P51 320 aaKnown RBP23.73■■□□□ 1.39
LIMD2-204ENST00000578297 ZNF783Q6ZMS7 281 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 ARFGAP1Q8N6T3 406 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 OR2T3Q8NH03 318 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 RPL10LQ96L21 214 aaKnown RBP23.73■■□□□ 1.39
LIMD2-204ENST00000578297 DEF6Q9H4E7 631 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 SLCO3A1Q9UIG8 710 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 VPS28Q9UK41 221 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 NEU3Q9UQ49 428 aa23.73■■□□□ 1.39
LIMD2-204ENST00000578297 ILVBLA1L0T0 632 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 RHOQP17081 205 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 BCKDHBP21953 392 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 NNMTP40261 264 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 ZNF75DP51815 510 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 GALCP54803 685 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 ACAP1Q15027 740 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 KIAA1324Q6UXG2 1013 aaKnown RBP23.72■■□□□ 1.39
LIMD2-204ENST00000578297 NLRP14Q86W24 1093 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 PYROXD2Q8N2H3 581 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 FRMD1Q8N878 549 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 PRCCQ92733 491 aaPredicted RBP23.72■■□□□ 1.39
LIMD2-204ENST00000578297 TBC1D31Q96DN5 1066 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 SIPA1Q96FS4 1042 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 MRFAP1L1Q96HT8 127 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 CHP1Q99653 195 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 NCAPGQ9BPX3 1015 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 HINFPQ9BQA5 517 aa23.72■■□□□ 1.39
LIMD2-204ENST00000578297 MBD1Q9UIS9 605 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms