RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 DNAJC24Q6P3W2 148 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 PHLDB2Q86SQ0 1253 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
CCDC57-211ENST00000578187 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 CCDC117Q8IWD4 279 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-211ENST00000578187 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC57-211ENST00000578187 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 SELENOOQ9BVL4 669 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 RBSNQ9H1K0 784 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 SLC12A6Q9UHW9 1150 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
CCDC57-211ENST00000578187 ABCA7Q8IZY2 2146 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 SIGLEC16A6NMB1 481 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 F5H5T6 163 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 I6L893 689 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ARHGAP33O14559 1287 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 TBL1XO60907 577 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 RTN2O75298 545 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 PAGE1O75459 146 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ADCY5O95622 1261 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 EPHX1P07099 455 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 RRM1P23921 792 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 HLA-FP30511 346 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 SDC4P31431 198 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 IL12RB1P42701 662 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 RPS24P62847 133 aaKnown RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 FOXC1Q12948 553 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ZNF234Q14588 700 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 CCDC14Q49A88 953 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 FNDC3BQ53EP0 1204 aaKnown RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 SND1Q7KZF4 910 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 KIAA0907Q7Z7F0 614 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 GAS2L3Q86XJ1 694 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 LGI2Q8N0V4 545 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 AHI1Q8N157 1196 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 WFDC5Q8TCV5 224 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 RXFP2Q8WXD0 754 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 RNF34Q969K3 372 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ZNF419Q96HQ0 510 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-211ENST00000578187 DNAJC7Q99615 494 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 TKTL2Q9H0I9 626 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 SLC6A17Q9H1V8 727 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 CD248Q9HCU0 757 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ANLNQ9NQW6 1124 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 ARHGAP20Q9P2F6 1191 aa13.18□□□□□ -0.3
CCDC57-211ENST00000578187 NCOR2Q9Y618 2525 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 UPK3BL1B0FP48 263 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 UPK3BL2E5RIL1 263 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 GIPC1O14908 333 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 LUC7L3O95232 432 aaKnown RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 ATP5BP06576 529 aaKnown RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 GPD1P21695 349 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 ENPP2Q13822 863 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 HNRNPDQ14103 355 aaKnown RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 C15orf59Q2T9L4 293 aaPredicted RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 TTC39BQ5VTQ0 682 aaPredicted RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 PLEKHA7Q6IQ23 1121 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 WDR59Q6PJI9 974 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 VPS36Q86VN1 386 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 TMPRSS6Q8IU80 811 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 SLC41A1Q8IVJ1 513 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 DRC7Q8IY82 874 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 MINDY1Q8N5J2 469 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 TOE1Q96GM8 510 aaKnown RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 LMLNQ96KR4 655 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 MCEEQ96PE7 176 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 ZDHHC5Q9C0B5 715 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 WDCPQ9H6R7 721 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 FBRSQ9HAH7 460 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 ITM2CQ9NQX7 267 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 USP36Q9P275 1121 aaKnown RBP13.17□□□□□ -0.3
CCDC57-211ENST00000578187 HS3ST4Q9Y661 456 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 CHD5Q8TDI0 1954 aa13.17□□□□□ -0.3
CCDC57-211ENST00000578187 SDK1Q7Z5N4 2213 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 MFAP3LO75121 409 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 PABPC1P11940 636 aaKnown RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 TPMTP51580 245 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ZNF143P52747 638 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 HDAC4P56524 1084 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 RPL7AP62424 266 aaKnown RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ATP11AP98196 1134 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 SLC14A1Q13336 389 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms