RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SLC18A3Q16572 532 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 MAP7D1Q3KQU3 841 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 CCDC122Q5T0U0 273 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 FAM72AQ5TYM5 149 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 FAM72DQ6L9T8 149 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 SCYL2Q6P3W7 929 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 PRR23BQ6ZRT6 265 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 CEP68Q76N32 757 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 SETD3Q86TU7 594 aaPredicted RBP19.87■□□□□ 0.77
SS18-208ENST00000577751 FAM72BQ86X60 149 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 CNGA4Q8IV77 575 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 PGBD3Q8N328 593 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 ARFGAP1Q8N6T3 406 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 CHP1Q99653 195 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 MKRN2Q9H000 416 aaKnown RBP19.87■□□□□ 0.77
SS18-208ENST00000577751 RETREG1Q9H6L5 497 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 ZNHIT6Q9NWK9 470 aaKnown RBP19.87■□□□□ 0.77
SS18-208ENST00000577751 RAB23Q9ULC3 237 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 FZD10Q9ULW2 581 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 NEU3Q9UQ49 428 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 PIEZO1Q92508 2521 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 AKR1B15C9JRZ8 316 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 ZBTB24O43167 697 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 SYNCRIPO60506 623 aaKnown RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 LRIG2O94898 1065 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 CYP1A2P05177 515 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 DESP17661 470 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 L1CAMP32004 1257 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 VASPP50552 380 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 GALCP54803 685 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 ST8SIA6P61647 398 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 GFPT1Q06210 699 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 SULT2A1Q06520 285 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 TSR1Q2NL82 804 aaKnown RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 RNF219Q5W0B1 726 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 LAIR1Q6GTX8 287 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 METTL3Q86U44 580 aaKnown RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 KBTBD6Q86V97 674 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 C11orf74Q86VG3 221 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 FAM160A2Q8N612 972 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 ZNF366Q8N895 744 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 RUBCNQ92622 972 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 ERLEC1Q96DZ1 483 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 MRFAP1L1Q96HT8 127 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 DUSP15Q9H1R2 295 aaPredicted RBP19.86■□□□□ 0.77
SS18-208ENST00000577751 SLC6A17Q9H1V8 727 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 SUN2Q9UH99 717 aa19.86■□□□□ 0.77
SS18-208ENST00000577751 OTOGLQ3ZCN5 2332 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 CHD5Q8TDI0 1954 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 RHOCP08134 193 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 OR1E1P30953 314 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 ZNF75DP51815 510 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 BYSLQ13895 437 aaKnown RBP19.85■□□□□ 0.77
SS18-208ENST00000577751 ACAP1Q15027 740 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 LPAL2Q16609 132 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 PLK5Q496M5 336 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 EFHC2Q5JST6 749 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 C6orf118Q5T5N4 469 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 TFAP2DQ7Z6R9 452 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 TMPRSS6Q8IU80 811 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 RLN3Q8WXF3 142 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 PRDM16Q9HAZ2 1276 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 PRSS16Q9NQE7 514 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 SLCO3A1Q9UIG8 710 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 INVSQ9Y283 1065 aa19.85■□□□□ 0.77
SS18-208ENST00000577751 ILVBLA1L0T0 632 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 ZNF217O75362 1048 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 RNF8O76064 485 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 RHOQP17081 205 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 SEMA3BQ13214 749 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 HNRNPA1L2Q32P51 320 aaKnown RBP19.84■□□□□ 0.77
SS18-208ENST00000577751 ZNF783Q6ZMS7 281 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 NLRP14Q86W24 1093 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 PYROXD2Q8N2H3 581 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 FRMD1Q8N878 549 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 TC2NQ8N9U0 490 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 OR2T3Q8NH03 318 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 ARHGEF26Q96DR7 871 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 LOXL4Q96JB6 756 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 RPL10LQ96L21 214 aaKnown RBP19.84■□□□□ 0.77
SS18-208ENST00000577751 PSMB7Q99436 277 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 NCAPGQ9BPX3 1015 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 NHEJ1Q9H9Q4 299 aaPredicted RBP19.84■□□□□ 0.77
SS18-208ENST00000577751 FBRSQ9HAH7 460 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 TMEM248Q9NWD8 314 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 VPS28Q9UK41 221 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 GPR179Q6PRD1 2367 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 ABCA7Q8IZY2 2146 aa19.84■□□□□ 0.77
SS18-208ENST00000577751 A0A0D9SEW6 157 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 LRCH4O75427 683 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 RETP07949 1114 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 BCKDHBP21953 392 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 MIPP30301 263 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 NUMBP49757 651 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 STK19P49842 368 aaPredicted RBP19.83■□□□□ 0.77
SS18-208ENST00000577751 CYP4V2Q6ZWL3 525 aaPredicted RBP19.83■□□□□ 0.77
SS18-208ENST00000577751 TBC1D31Q96DN5 1066 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 SPACA7Q96KW9 195 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 PEBP4Q96S96 227 aa19.83■□□□□ 0.77
SS18-208ENST00000577751 MUC3BQ9H195 1237 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms