RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 PRICKLE1Q96MT3 831 aaPredicted RBP15.67■□□□□ 0.1
SS18-206ENST00000577572 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
SS18-206ENST00000577572 GDF3Q9NR23 364 aa15.67■□□□□ 0.1
SS18-206ENST00000577572 FAM114A2Q9NRY5 505 aa15.67■□□□□ 0.1
SS18-206ENST00000577572 HAUS2Q9NVX0 235 aa15.67■□□□□ 0.1
SS18-206ENST00000577572 THG1LQ9NWX6 298 aaKnown RBP15.67■□□□□ 0.1
SS18-206ENST00000577572 MPP6Q9NZW5 540 aa15.67■□□□□ 0.1
SS18-206ENST00000577572 TRHDEQ9UKU6 1024 aa15.67■□□□□ 0.1
SS18-206ENST00000577572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
SS18-206ENST00000577572 SGK1O00141 431 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
SS18-206ENST00000577572 CNTN5O94779 1100 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 RHOXF2BP0C7M4 288 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 ITIH2P19823 946 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 CAV1Q03135 178 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 CBX2Q14781 532 aaPredicted RBP15.66■□□□□ 0.1
SS18-206ENST00000577572 PDGFRLQ15198 375 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 FAM78AQ5JUQ0 283 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 RFWD3Q6PCD5 774 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 GET4Q7L5D6 327 aaPredicted RBP15.66■□□□□ 0.1
SS18-206ENST00000577572 PCGF5Q86SE9 256 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 ZC3H18Q86VM9 953 aaKnown RBP15.66■□□□□ 0.1
SS18-206ENST00000577572 CCDC13Q8IYE1 715 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 ATPAF2Q8N5M1 289 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 BPIFB1Q8TDL5 484 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 ING5Q8WYH8 240 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 SUSD6Q92537 303 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 LRRC45Q96CN5 670 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 ZNF599Q96NL3 588 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 PPP1R2P1Q96PQ5 205 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 RHOXF2Q9BQY4 288 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 SLC2A11Q9BYW1 496 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 ZFP14Q9HCL3 533 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 WHRNQ9P202 907 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 PAK5Q9P286 719 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 CD207Q9UJ71 328 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 CCL26Q9Y258 94 aa15.66■□□□□ 0.1
SS18-206ENST00000577572 KCNN4O15554 427 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 OPHN1O60890 802 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 LUC7L3O95232 432 aaKnown RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 PENKP01210 267 aaPredicted RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 KRT14P02533 472 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 RPS24P62847 133 aaKnown RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 IFI35P80217 286 aaPredicted RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 TNK2Q07912 1038 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 POLD3Q15054 466 aaPredicted RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 MTSS1LQ765P7 747 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 OTOP3Q7RTS5 596 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 CCNYQ8ND76 341 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 FIBINQ8TAL6 211 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 DEPDC1BQ8WUY9 529 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 OSCP1Q8WVF1 389 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 IRF7Q92985 503 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 ELSPBP1Q96BH3 223 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 SLC39A8Q9C0K1 460 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 TSPYL1Q9H0U9 437 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 NOL6Q9H6R4 1146 aaKnown RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 EPS15L1Q9UBC2 864 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 DMGDHQ9UI17 866 aaKnown RBP15.65■□□□□ 0.1
SS18-206ENST00000577572 MFHAS1Q9Y4C4 1052 aa15.65■□□□□ 0.1
SS18-206ENST00000577572 TRIOBPQ9H2D6 2365 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 UQCRHLA0A096LP55 91 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 RASA4BC9J798 803 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 MATN3O15232 486 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 RASA4O43374 803 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 MAFKO60675 156 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 UQCRHP07919 91 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 RHOCP08134 193 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 RBL1P28749 1068 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 GUCY2DQ02846 1103 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 GNA12Q03113 381 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 DLX2Q07687 328 aaPredicted RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 IL10RBQ08334 325 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 AP1B1Q10567 949 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 SERINC3Q13530 473 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 HNRNPDQ14103 355 aaKnown RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 RFTN1Q14699 578 aaPredicted RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 BRD3Q15059 726 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 TFAP2DQ7Z6R9 452 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 ADGRG2Q8IZP9 1017 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 CFAP52Q8N1V2 620 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 FAM71DQ8N9W8 422 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 DDI1Q8WTU0 396 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 NSMCE1Q8WV22 266 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 MAML1Q92585 1016 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 P2RY11Q96G91 374 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 LGMNQ99538 433 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 FAM118BQ9BPY3 351 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 FOXP3Q9BZS1 431 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 EPB41L5Q9HCM4 733 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 SPHK2Q9NRA0 654 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 KIAA1522Q9P206 1035 aaPredicted RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 IPO11Q9UI26 975 aaKnown RBP15.64■□□□□ 0.09
SS18-206ENST00000577572 HPCAL4Q9UM19 191 aa15.64■□□□□ 0.09
SS18-206ENST00000577572 PRRC2BQ5JSZ5 2229 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms