RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 RIPOR3Q96MK2 946 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 PRICKLE1Q96MT3 831 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 DACH2Q96NX9 599 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 LENG8Q96PV6 779 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 PPP1R10Q96QC0 940 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 SIN3AQ96ST3 1273 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 PRPF18Q99633 342 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 SELENOSQ9BQE4 189 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 LLPHQ9BRT6 129 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 SPXQ9BT56 116 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 C9orf16Q9BUW7 83 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 TRIM62Q9BVG3 475 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 MXD3Q9BW11 206 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 NFKBIZQ9BYH8 718 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 LSG1Q9H089 658 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 CARD9Q9H257 536 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 TOR3AQ9H497 397 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 ZSCAN16Q9H4T2 348 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 LRRC19Q9H756 370 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 SYNDIG1Q9H7V2 258 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 GORASP2Q9H8Y8 452 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 JMJD4Q9H9V9 463 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 KRT84Q9NSB2 600 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 RIC8BQ9NVN3 520 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 COQ3Q9NZJ6 369 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 UBA2Q9UBT2 640 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 ADD3Q9UEY8 706 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 CD300AQ9UGN4 299 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 CIDEBQ9UHD4 219 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 RPS6KA6Q9UK32 745 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 CPSF3Q9UKF6 684 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 SLC13A4Q9UKG4 626 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 ANGPTL2Q9UKU9 493 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 ARHGAP26Q9UNA1 814 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 AURKCQ9UQB9 309 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 TRPV2Q9Y5S1 764 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 BZW2Q9Y6E2 419 aaKnown RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 RSF1Q96T23 1441 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-204ENST00000577468 ATP8B3O60423 1300 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 XDHP47989 1333 aa3.18□□□□□ -1.9
PTPRM-204ENST00000577468 CYP3A7-CYP3A51PA0A087WV96 503 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 LOC105371267A0A1B0GV96 52 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 GOLGA8IPA6NC78 632 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 FAM90A27PA6NNH2 459 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 HSBP1L1C9JCN9 74 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 PSMA7O14818 248 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 LIN7AO14910 233 aaPredicted RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 PER2O15055 1255 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CHUKO15111 745 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SCAMP1O15126 338 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 WDR46O15213 610 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 IRAK2O43187 625 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SLC25A17O43808 307 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 PEX1O43933 1283 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SYNCRIPO60506 623 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 IDH1O75874 414 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ATP5HO75947 161 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 RNF8O76064 485 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 DDAH1O94760 285 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SEC31AO94979 1220 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SGPL1O95470 568 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CRTAMO95727 393 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ZBED1O96006 694 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 MT-CO1P00395 513 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 APOEP02649 317 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CSTBP04080 98 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CCDC166P0CW27 439 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ALADP13716 330 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ZNF37AP17032 561 aaPredicted RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ABCB4P21439 1286 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 GPTP24298 496 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CYP3A7P24462 503 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 AOAHP28039 575 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 HOXA6P31267 233 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 BMI1P35226 326 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 NUP62P37198 522 aaPredicted RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 MLH1P40692 756 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 PPP1R2P41236 205 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 IARSP41252 1262 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ACAA2P42765 397 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 OR1G1P47890 313 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 PCP4P48539 62 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 HSPA13P48723 471 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SERPINB8P50452 374 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 TUBP50607 506 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CCR3P51677 355 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ARL4CP56559 192 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 GSDMDP57764 484 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 HERVK_113P62684 666 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CYP4F2P78329 520 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 SMAD3P84022 425 aaKnown RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 TAP1Q03518 808 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 PRKCZQ05513 592 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ACTN3Q08043 901 aaPredicted RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 DNAJC3Q13217 504 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ITGB3BPQ13352 177 aaPredicted RBP3.17□□□□□ -1.9
PTPRM-204ENST00000577468 ERV3-1Q14264 604 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 DHCR24Q15392 516 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 TAF5Q15542 800 aa3.17□□□□□ -1.9
PTPRM-204ENST00000577468 CNGA2Q16280 664 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms