RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DRAXINQ8NBI3 349 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 PTCD3Q96EY7 689 aaKnown RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SLC13A4Q9UKG4 626 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 FAM32AQ9Y421 112 aaKnown RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNAP91O60641 907 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 DSG3P32926 999 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SLC6A3Q01959 620 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 OR52K1Q8NGK4 314 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 JOSD2Q8TAC2 188 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 FAM136AQ96C01 138 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 COX4I2Q96KJ9 171 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNX15Q9NRS6 342 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 PSMB4P28070 264 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SOX6P35712 828 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 POLD3Q15054 466 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 VWA5B1Q5TIE3 1220 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 METTL21CQ5VZV1 264 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SCARA3Q6AZY7 606 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 BNIPLQ7Z465 357 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 LENG8Q96PV6 779 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNRNP25Q9BV90 132 aaKnown RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 IMPAD1Q9NX62 359 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 STK39Q9UEW8 545 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZNF180Q9UJW8 692 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 BNIP3LO60238 219 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 SV2CQ496J9 727 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 CIB1Q99828 191 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 OSBPL6Q9BZF3 934 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 CHRM3P20309 590 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 CCR3P51677 355 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 SQLEQ14534 574 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 NOMO1Q15155 1222 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 MTX3Q5HYI7 312 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZNF470Q6ECI4 717 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 NPAS2Q99743 824 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 C6orf62Q9GZU0 229 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 PKP3Q9Y446 797 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 MED26O95402 600 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 CLK2P49760 499 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 YWHAZP63104 245 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 PEX6Q13608 980 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 PRKD1Q15139 912 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZIK1Q3SY52 487 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 OR8H2Q8N162 312 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 SPEF2Q9C093 1822 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 NOL11Q9H8H0 719 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 MID1IP1Q9NPA3 183 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 EIF3LQ9Y262 564 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 NCF1BA6NI72 391 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 NCF1CA8MVU1 366 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRAFD1O14545 582 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 PARNO95453 639 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 F9P00740 461 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 NCF1P14598 390 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 ITGB5P18084 799 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 XPAP23025 273 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 LAMTOR4Q0VGL1 99 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZC3H12BQ5HYM0 836 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 LIPMQ5VYY2 423 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 OR7A2PQ8NGA2 310 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 CAPSLQ8WWF8 208 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 PPP1R14BQ96C90 147 aa13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 SCAF8Q9UPN6 1271 aaKnown RBP13.35□□□□□ -0.27
PCDHGB3-201ENST00000576222 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 MATN2O00339 956 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 CYP2C9P11712 490 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ADSSP30520 456 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 AKT1P31749 480 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TAF6P49848 677 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TTC23Q5W5X9 447 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRIM69Q86WT6 500 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZDHHC17Q8IUH5 632 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 AFG1LQ8WV93 481 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 FIG4Q92562 907 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 MMP19Q99542 508 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 LATS2Q9NRM7 1088 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TPRKBQ9Y3C4 175 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 MTF2Q9Y483 593 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 DHRS12A0PJE2 317 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRIM24O15164 1050 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 HS6ST1O60243 411 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 IFNA8P32881 189 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 HK2P52789 917 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 RAD51Q06609 339 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 INSCQ1MX18 579 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 EGFLAMQ63HQ2 1017 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 PIWIL4Q7Z3Z4 852 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ABI1Q8IZP0 508 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 EBF4Q9BQW3 602 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms