RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 ATP5BP06576 529 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 CD48P09326 243 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 MSNP26038 577 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 ETFBP38117 255 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 CETN2P41208 172 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 DNA2P51530 1060 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 MMRN1Q13201 1228 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 DPYSL3Q14195 570 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 EIF4HQ15056 248 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 E2F5Q15329 346 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 MBLAC2Q68D91 279 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 CXorf57Q6NSI4 855 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 NT5DC3Q86UY8 548 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 REXO1L1PQ8IX06 675 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 RCOR2Q8IZ40 523 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 PHTF2Q8N3S3 785 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 TRIM58Q8NG06 486 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 PJA1Q8NG27 643 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 RAPGEF5Q92565 580 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 CSPG4P5Q96PW8 444 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 ZNF670Q9BS34 389 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 RBM12Q9NTZ6 932 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 ELOVL2Q9NXB9 296 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 VPS28Q9UK41 221 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 MTF2Q9Y483 593 aaPredicted RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 A0A0A0MRY4 1105 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 ILVBLA1L0T0 632 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 WASH4PA8MWX3 477 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 PRRT4C9JH25 899 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 KIF5CO60282 957 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 RAMP2O60895 175 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 RNF40O75150 1001 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 CHRNB1P11230 501 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 CTNNA2P26232 953 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 MZF1P28698 734 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 TIE1P35590 1138 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 MARCKSL1P49006 195 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 NUMBP49757 651 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 ARSEP51690 589 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 RWDD2BP57060 319 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 GNA12Q03113 381 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 DPYSQ14117 519 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 POLD3Q15054 466 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 PLEKHG6Q3KR16 790 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 C2orf27AQ580R0 203 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 ANKRD20A8PQ5CZ79 823 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 PITRM1Q5JRX3 1037 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 IL31Q6EBC2 164 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 TMCO3Q6UWJ1 677 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 ZNF783Q6ZMS7 281 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 NLRP14Q86W24 1093 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 RFX6Q8HWS3 928 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 KATNAL2Q8IYT4 538 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 APCDD1Q8J025 514 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 SYNPOQ8N3V7 929 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 FAM71BQ8TC56 605 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 UBE2Q2Q8WVN8 375 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 KRT35Q92764 455 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 RBM41Q96IZ5 413 aaKnown RBP14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 ATP13A1Q9HD20 1204 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 HPCAL4Q9UM19 191 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 PACSIN2Q9UNF0 486 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 PLA2G4CQ9UP65 541 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 NEU3Q9UQ49 428 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 PCDHA3Q9Y5H8 950 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 ZDBF2Q9HCK1 2354 aa14.89□□□□□ -0.03
NPLOC4-218ENST00000574964 K7EQS6 105 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 ASLP04424 464 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 DCNP07585 359 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 AOC1P19801 751 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 SERPINB6P35237 376 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 PLK1P53350 603 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 YBEYP58557 167 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 ST8SIA6P61647 398 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 MRPS21P82921 87 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 SULT2A1Q06520 285 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 CCINQ13939 588 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 RPS6KA1Q15418 735 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 ARTNQ5T4W7 220 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 CWF19L1Q69YN2 538 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 SDE2Q6IQ49 451 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 TRMT11Q7Z4G4 463 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 KIAA0907Q7Z7F0 614 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 ADIPOR2Q86V24 386 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 SFTPA1Q8IWL2 248 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 CCDC105Q8IYK2 499 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 LZTR1Q8N653 840 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 ZNF513Q8N8E2 541 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 OR7D4Q8NG98 312 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 EXD1Q8NHP7 514 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 TSC1Q92574 1164 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 FEM1AQ9BSK4 669 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 C2orf49Q9BVC5 232 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 MAGEH1Q9H213 219 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 NDFIP2Q9NV92 336 aa14.88□□□□□ -0.03
NPLOC4-218ENST00000574964 ZNF212Q9UDV6 495 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms