RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DEPDC1BQ8WUY9 529 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 RUNDC3BQ96NL0 473 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 DONSONQ9NYP3 566 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 PLK2Q9NYY3 685 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 DRG1Q9Y295 367 aaKnown RBP24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 RAD54BQ9Y620 910 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 ECEL1O95672 775 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 DHX34Q14147 1143 aaKnown RBP24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 MPPE1Q53F39 396 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 SLC45A4Q5BKX6 768 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 TMEM25Q86YD3 366 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 CDKL3Q8IVW4 592 aaPredicted RBP24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 CARNMT1Q8N4J0 409 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 TFB1MQ8WVM0 346 aaKnown RBP24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 HINFPQ9BQA5 517 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 TRIM51Q9BSJ1 452 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 ZFP14Q9HCL3 533 aa24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 DUS2Q9NX74 493 aaKnown RBP24.66■■□□□ 1.54
ATPAF1-213ENST00000574428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 SGK1O00141 431 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 SLC9A3R1O14745 358 aaPredicted RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 PPP1R12AO14974 1030 aaPredicted RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 RBL1P28749 1068 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 GARSP41250 739 aaKnown RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 NDST2P52849 883 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 GDF10P55107 478 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 ZNF177Q13360 481 aaPredicted RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 FAM182AQ5T1J6 154 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 ARHGAP36Q6ZRI8 547 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 MAATS1Q7Z4T9 603 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 PRUNE1Q86TP1 453 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 JAMLQ86YT9 394 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 ALLCQ8N6M5 410 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 FAM71DQ8N9W8 422 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 OR52K2Q8NGK3 314 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 GRK7Q8WTQ7 553 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 ASIC4Q96FT7 647 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 RAMP2O60895 175 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 MX2P20592 715 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 HOXD9P28356 352 aaPredicted RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 NUMBP49757 651 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 PAPOLAP51003 745 aaKnown RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 NRLP54845 237 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 AP1B1Q10567 949 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 PRKD1Q15139 912 aaPredicted RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 TRIM68Q6AZZ1 485 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 FBXO38Q6PIJ6 1188 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 GPR161Q8N6U8 529 aaKnown RBP24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 OSCP1Q8WVF1 389 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 RSAD2Q8WXG1 361 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 SLCO2A1Q92959 643 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 OTUB2Q96DC9 234 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 HMCESQ96FZ2 354 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 ZFYVE19Q96K21 471 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 KXD1Q9BQD3 176 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 RETREG1Q9H6L5 497 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 OBP2AQ9NY56 170 aa24.65■■□□□ 1.54
ATPAF1-213ENST00000574428 BCLAF3A2AJT9 711 aaKnown RBP24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 HACD1B0YJ81 288 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 RASA4BC9J798 803 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 H0Y626 953 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 NCAM2O15394 837 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 KCNN4O15554 427 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 RASA4O43374 803 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 LUC7L3O95232 432 aaKnown RBP24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 CYBBP04839 570 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 VAV1P15498 845 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 LMNB2Q03252 620 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 PPP1R7Q15435 360 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 TRIP13Q15645 432 aaPredicted RBP24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 GLE1Q53GS7 698 aaKnown RBP24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 FYB2Q5VWT5 728 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 CCDC70Q6NSX1 233 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 PARM1Q6UWI2 310 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 VITQ6UXI7 678 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 ATPAF2Q8N5M1 289 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 GLIS1Q8NBF1 620 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 IRF7Q92985 503 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 SPHK2Q9NRA0 654 aa24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 FEZ2Q9UHY8 353 aaPredicted RBP24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 SPTBN5Q9NRC6 3674 aaKnown RBP24.64■■□□□ 1.53
ATPAF1-213ENST00000574428 NYNRINQ9P2P1 1898 aaKnown RBP24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 GAS8O95995 478 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 IFNB1P01574 187 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 RHOCP08134 193 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 ETS1P14921 441 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 IFNAR2P48551 515 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 TUBB4BP68371 445 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 PPIDQ08752 370 aaKnown RBP24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 SMAD4Q13485 552 aaKnown RBP24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 POLD3Q15054 466 aaPredicted RBP24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 FSCBQ5H9T9 825 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 LY6G5CQ5SRR4 150 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 C6orf118Q5T5N4 469 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 CXorf57Q6NSI4 855 aaKnown RBP24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 ADGRG2Q8IZP9 1017 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 WFDC5Q8TCV5 224 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 FGF14Q92915 247 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 HDAC11Q96DB2 347 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 PLA2G2FQ9BZM2 168 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms