RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 NDFIP2Q9NV92 336 aa7.73□□□□□ -1.17
RPA1-207ENST00000574049 PLXNB2O15031 1838 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SHOX2O60902 331 aaPredicted RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 CILPO75339 1184 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 ZNF189O75820 626 aaPredicted RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 SOAT2O75908 522 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 DNAJC8O75937 253 aaPredicted RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 GFAPP14136 432 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TGM2P21980 687 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CYP2F1P24903 491 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 PNPLA4P41247 253 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 STX1BP61266 288 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 FAAP100Q0VG06 881 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 AUHQ13825 339 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 KBTBD12Q3ZCT8 623 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TXNRD3NBQ6F5E7 133 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 BBS5Q8N3I7 341 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CAVIN3Q969G5 261 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 FAXDC2Q96IV6 333 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 KCNK16Q96T55 309 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 UPF3AQ9H1J1 476 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 MANSC1Q9H8J5 431 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CYP3A43Q9HB55 503 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TTC36A6NLP5 189 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 RASSF9O75901 435 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 PTPN1P18031 435 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 EN2P19622 333 aaPredicted RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 RAB27AP51159 221 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 AQP5P55064 265 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 GEMIN4P57678 1058 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 CBLBQ13191 982 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 MBTPS1Q14703 1052 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 KCTD21Q4G0X4 260 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CTXN3Q4LDR2 81 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SLC39A12Q504Y0 691 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 BOLA3Q53S33 107 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TTC39BQ5VTQ0 682 aaPredicted RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 DPY19L2P1Q6NXN4 242 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 PMF1Q6P1K2 205 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 LRIG3Q6UXM1 1119 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SLC39A5Q6ZMH5 540 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.72□□□□□ -1.173e-11■■■■■ 32.2
RPA1-207ENST00000574049 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SZRD1Q7Z422 152 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 YTHDF3Q7Z739 585 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 CHSY1Q86X52 802 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 UNC45BQ8IWX7 931 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TEX9Q8N6V9 391 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TRIML2Q8N7C3 387 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 ATAD1Q8NBU5 361 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 ELMO2Q96JJ3 720 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 LRGUKQ96M69 825 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CNPY3Q9BT09 278 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 MYLK2Q9H1R3 596 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 THEGQ9P2T0 379 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 GIT1Q9Y2X7 761 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 MYO18AQ92614 2054 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 FAM237BA0A1B0GVD1 139 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 WDR27A2RRH5 827 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TRDMT1O14717 391 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 NBNO60934 754 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SNRPAP09012 282 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 ODC1P11926 461 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TSPAN8P19075 237 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 HADHAP40939 763 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 NDUFV1P49821 464 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 ROR2Q01974 943 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 TUSC3Q13454 348 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CCNG2Q16589 344 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 SLC44A4Q53GD3 710 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 PPP1R2P3Q6NXS1 205 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 FBXO46Q6PJ61 603 aaPredicted RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 OSTM1Q86WC4 334 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 C7orf61Q8IZ16 206 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 ATPAF2Q8N5M1 289 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 COLGALT1Q8NBJ5 622 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 C3orf58Q8NDZ4 430 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 EXD1Q8NHP7 514 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 CLEC4CQ8WTT0 213 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 EGFL8Q99944 293 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 ZNF518BQ9C0D4 1074 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 TBC1D13Q9NVG8 400 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 NDE1Q9NXR1 346 aa7.72□□□□□ -1.17
RPA1-207ENST00000574049 IPO11Q9UI26 975 aaKnown RBP7.72□□□□□ -1.17
RPA1-207ENST00000574049 TPRP12270 2363 aaKnown RBP7.71□□□□□ -1.17
RPA1-207ENST00000574049 ENPP3O14638 875 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 DDHD2O94830 711 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 APOEP02649 317 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 ERVK-10P10266 1014 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 VCPP55072 806 aaKnown RBP7.71□□□□□ -1.17
RPA1-207ENST00000574049 AGBL2Q5U5Z8 902 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 SLFN11Q7Z7L1 901 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 RTN4RL1Q86UN2 441 aaPredicted RBP7.71□□□□□ -1.17
RPA1-207ENST00000574049 PIGZQ86VD9 579 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 CYP4X1Q8N118 509 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 SNX31Q8N9S9 440 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 B3GALNT2Q8NCR0 500 aa7.71□□□□□ -1.17
RPA1-207ENST00000574049 PYDC1Q8WXC3 89 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms