RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 THAP10Q9P2Z0 257 aaPredicted RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 TLR6Q9Y2C9 796 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 NFE2L3Q9Y4A8 694 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 STON1Q9Y6Q2 735 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 KIAA1549LQ6ZVL6 1849 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 EML5Q05BV3 1969 aa7.71□□□□□ -1.17
NUP88-205ENST00000572809 MYO18AQ92614 2054 aaKnown RBP7.71□□□□□ -1.17
NUP88-205ENST00000572809 EIF1AYO14602 144 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 IRAK2O43187 625 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 TBL1XO60907 577 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 CPNE3O75131 537 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 ZNF217O75362 1048 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 TRUB2O95900 331 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 TPM2P07951 284 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 GLI1P08151 1106 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 BCKDHBP21953 392 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 HOXD9P28356 352 aaPredicted RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 MPLP40238 635 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 DHPSP49366 369 aaPredicted RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 DAB2P98082 770 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 ARID5AQ03989 594 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 PDCLQ13371 301 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 RAPGEF1Q13905 1077 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 UBAP2LQ14157 1087 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 ZNF234Q14588 700 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 DRAP1Q14919 205 aaPredicted RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 EIF4HQ15056 248 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 SF3A2Q15428 464 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 AASDHQ4L235 1098 aaPredicted RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 DCAF6Q58WW2 860 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SPDYCQ5MJ68 293 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 MPP7Q5T2T1 576 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 PIK3R6Q5UE93 754 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 KLHDC7AQ5VTJ3 777 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 PMS2CLQ68D20 193 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 TMEM215Q68D42 235 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 OR6B2Q6IFH4 312 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 KIAA1211LQ6NV74 962 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 RFWD3Q6PCD5 774 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 RBM43Q6ZSC3 357 aaKnown RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 LPCAT2Q7L5N7 544 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 ZNF438Q7Z4V0 828 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SLC47A2Q86VL8 602 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 PASD1Q8IV76 773 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 NETO1Q8TDF5 533 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 ERLEC1Q96DZ1 483 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SLC39A13Q96H72 371 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 NOX5Q96PH1 765 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 CPXM1Q96SM3 734 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 RTKNQ9BST9 563 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 STK33Q9BYT3 514 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 CIPCQ9C0C6 399 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 VPS16Q9H269 839 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 PDCL3Q9H2J4 239 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SMOC1Q9H4F8 434 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 CD248Q9HCU0 757 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 ANO10Q9NW15 660 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 FANCLQ9NW38 375 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.71□□□□□ -1.18
NUP88-205ENST00000572809 TJP2Q9UDY2 1190 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SLC12A6Q9UHW9 1150 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 MBD1Q9UIS9 605 aaPredicted RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 AJAP1Q9UKB5 411 aaPredicted RBP7.71□□□□□ -1.18
NUP88-205ENST00000572809 PLA2G4CQ9UP65 541 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 RAD54BQ9Y620 910 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 SPTBN4Q9H254 2564 aa7.71□□□□□ -1.18
NUP88-205ENST00000572809 WDR87Q6ZQQ6 2873 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SDK1Q7Z5N4 2213 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 RALGAPA1Q6GYQ0 2036 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 TYW5A2RUC4 315 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 DCDC2BA2VCK2 349 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SLC30A4O14863 429 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 AP5Z1O43299 807 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SYNCRIPO60506 623 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 PNMA6AP0CW24 399 aaPredicted RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 UCHL3P15374 230 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 CYP11B1P15538 503 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 HLA-FP30511 346 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SLC6A4P31645 630 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 IL12RB1P42701 662 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SGSHP51688 502 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 CDK17Q00537 523 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SLC6A3Q01959 620 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ENPP2Q13822 863 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 STARD3Q14849 445 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 KRT31Q15323 416 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 TAF5Q15542 800 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 FAM133BQ5BKY9 247 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 ZC3H12AQ5D1E8 599 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 MS4A13Q5J8X5 152 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 CDKAL1Q5VV42 579 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 NADSYN1Q6IA69 706 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SLC36A4Q6YBV0 504 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 C11orf57Q6ZUT1 292 aaPredicted RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 CHST9Q7L1S5 443 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms