RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 USP30Q70CQ3 517 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 SLC26A9Q7LBE3 791 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 ATP6V0D2Q8N8Y2 350 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 ZNF397Q8NF99 534 aaPredicted RBP18.68■□□□□ 0.58
CHD3-214ENST00000572579 BAHD1Q8TBE0 780 aaPredicted RBP18.68■□□□□ 0.58
CHD3-214ENST00000572579 NT5C3BQ969T7 300 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 NPY6RQ99463 290 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 TMPRSS4Q9NRS4 437 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 TM7SF3Q9NS93 570 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 TOR4AQ9NXH8 423 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 RALYQ9UKM9 306 aaKnown RBP18.68■□□□□ 0.58
CHD3-214ENST00000572579 ZMIZ1Q9ULJ6 1067 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 BTBD3Q9Y2F9 522 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 ANKRD6Q9Y2G4 727 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 NEUROG3Q9Y4Z2 214 aa18.68■□□□□ 0.58
CHD3-214ENST00000572579 TYW5A2RUC4 315 aaKnown RBP18.67■□□□□ 0.58
CHD3-214ENST00000572579 PAGE1O75459 146 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 DAB1O75553 588 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 WNT1P04628 370 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 ZNF883P0CG24 379 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 CYP11B1P15538 503 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 SLC8A1P32418 973 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 CDH5P33151 784 aaPredicted RBP18.67■□□□□ 0.58
CHD3-214ENST00000572579 KRT9P35527 623 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 MATKP42679 507 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 AFF3P51826 1226 aaKnown RBP18.67■□□□□ 0.58
CHD3-214ENST00000572579 NME3Q13232 169 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 C5orf22Q49AR2 442 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 C2CD6Q53TS8 623 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 FEM1AQ9BSK4 669 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 ADAMTS1Q9UHI8 967 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 SARDHQ9UL12 918 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 VANGL2Q9ULK5 521 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 MSRB2Q9Y3D2 182 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 CABIN1Q9Y6J0 2220 aa18.67■□□□□ 0.58
CHD3-214ENST00000572579 EDDM13A0A1B0GTR0 161 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 FAM47DPA6NHR8 397 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 M0QYT0 321 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 PLK4O00444 970 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 CNTN5O94779 1100 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 FTH1P19P0C7X4 201 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
CHD3-214ENST00000572579 ABCB4P21439 1286 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 NOS2P35228 1153 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 DRD3P35462 400 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 TTC31Q49AM3 519 aaPredicted RBP18.66■□□□□ 0.58
CHD3-214ENST00000572579 ALFQ53S48 1182 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 PRAMEF14Q5SWL7 426 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 SMYD5Q6GMV2 418 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 NOP9Q86U38 636 aaKnown RBP18.66■□□□□ 0.58
CHD3-214ENST00000572579 GANCQ8TET4 914 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 SLC6A18Q96N87 628 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 LMBRD1Q9NUN5 540 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 ARHGEF38Q9NXL2 777 aa18.66■□□□□ 0.58
CHD3-214ENST00000572579 A0A1B0GVM2 712 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 TCAF2A6NFQ2 919 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 H0Y8X5 98 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 RNF103O00237 685 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 TAF4O00268 1085 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 RNASEH2AO75792 299 aaKnown RBP18.65■□□□□ 0.58
CHD3-214ENST00000572579 SLC2A3P11169 496 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 CTSKP43235 329 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 GABRB2P47870 512 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 GRIA4P48058 902 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 PSMD8P48556 350 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 CXCR3P49682 368 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 KLK7P49862 253 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 RNASE9P60153 205 aaKnown RBP18.65■□□□□ 0.58
CHD3-214ENST00000572579 TPD52L1Q16890 204 aaPredicted RBP18.65■□□□□ 0.58
CHD3-214ENST00000572579 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 IL27RAQ6UWB1 636 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 GLRX5Q86SX6 157 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 RNF34Q969K3 372 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 FAM131CQ96AQ9 280 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 RPRD1AQ96P16 312 aaPredicted RBP18.65■□□□□ 0.58
CHD3-214ENST00000572579 PSMB7Q99436 277 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 SLC12A6Q9UHW9 1150 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 SCML1Q9UN30 329 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 TBC1D30Q9Y2I9 924 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 PCDHGB2Q9Y5G2 931 aa18.65■□□□□ 0.58
CHD3-214ENST00000572579 CELSR3Q9NYQ7 3312 aa18.64■□□□□ 0.58
CHD3-214ENST00000572579 A0A1W2PPC4 97 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 DKK1O94907 266 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 MOCS3O95396 460 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 CER1O95813 267 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 MT-CO1P00395 513 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 UCHL3P15374 230 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
CHD3-214ENST00000572579 SLC12A1Q13621 1099 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 RAPGEF1Q13905 1077 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 HNRNPDQ14103 355 aaKnown RBP18.64■□□□□ 0.57
CHD3-214ENST00000572579 SHBQ15464 509 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 ZNF423Q2M1K9 1284 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 RAB6CQ53S08 254 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 TCP11X2Q5H9J9 407 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 CLEC17AQ6ZS10 378 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 BNIPLQ7Z465 357 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 XYLT1Q86Y38 959 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 CCDC117Q8IWD4 279 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms